More than 300 homologs were found in PanDaTox collection
for query gene Gobs_4836 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  100 
 
 		 201 aa  384  1e-106  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  75.12 
 
 		 201 aa  281  4.0000000000000003e-75  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal  1 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  72.5 
 
 		 204 aa  277  8e-74  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  71.14 
 
 		 201 aa  266  1e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal  1 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  66.99 
 
 		 206 aa  253  2.0000000000000002e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  69.65 
 
 		 201 aa  247  8e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.207018 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  59.2 
 
 		 197 aa  213  1.9999999999999998e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal  1 
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  56.72 
 
 		 197 aa  208  4e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.516841 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  57.71 
 
 		 201 aa  201  9e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  56 
 
 		 204 aa  198  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  52.24 
 
 		 201 aa  197  9e-50  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.74 
 
 		 203 aa  193  2e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal  1 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  56.22 
 
 		 201 aa  189  2.9999999999999997e-47  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  50.75 
 
 		 223 aa  189  2.9999999999999997e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  51.74 
 
 		 200 aa  188  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal  1 
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  53 
 
 		 204 aa  188  5e-47  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  54.73 
 
 		 201 aa  185  4e-46  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  54.5 
 
 		 203 aa  185  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  53.73 
 
 		 200 aa  184  8e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  50 
 
 		 205 aa  181  5.0000000000000004e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  55.22 
 
 		 200 aa  181  7e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.29 
 
 		 211 aa  180  1e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  52.48 
 
 		 204 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal  1 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54 
 
 		 224 aa  179  2.9999999999999997e-44  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  54 
 
 		 205 aa  178  5.999999999999999e-44  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.116105 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.23 
 
 		 200 aa  177  1e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal  1 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  51.98 
 
 		 202 aa  173  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.524184 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  51.24 
 
 		 201 aa  171  6.999999999999999e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  50 
 
 		 202 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.900292 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  52.74 
 
 		 201 aa  169  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  47.26 
 
 		 201 aa  169  3e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  48.76 
 
 		 201 aa  168  4e-41  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.226774 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  42.29 
 
 		 200 aa  167  6e-41  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  50.25 
 
 		 201 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0367887 
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  53.16 
 
 		 190 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  53.73 
 
 		 200 aa  166  2e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  47.76 
 
 		 208 aa  166  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.313515 
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  48 
 
 		 212 aa  166  2.9999999999999998e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  50.75 
 
 		 201 aa  165  4e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.053163 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  47.76 
 
 		 227 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  41.79 
 
 		 200 aa  163  1.0000000000000001e-39  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  41.79 
 
 		 200 aa  163  1.0000000000000001e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  41.79 
 
 		 200 aa  163  2.0000000000000002e-39  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  41.79 
 
 		 200 aa  163  2.0000000000000002e-39  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  47.26 
 
 		 201 aa  163  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0345388 
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.76 
 
 		 201 aa  163  2.0000000000000002e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal  1 
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  42.29 
 
 		 200 aa  162  2.0000000000000002e-39  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  41.29 
 
 		 200 aa  162  3e-39  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  42.29 
 
 		 200 aa  162  3e-39  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  41.79 
 
 		 200 aa  162  4.0000000000000004e-39  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  41.79 
 
 		 200 aa  161  6e-39  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  41.79 
 
 		 200 aa  161  6e-39  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  48.26 
 
 		 200 aa  160  1e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  45.77 
 
 		 201 aa  160  1e-38  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.264232 
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  45.27 
 
 		 200 aa  158  6e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  42.79 
 
 		 200 aa  157  7e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  51.24 
 
 		 200 aa  157  8e-38  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.86401 
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  44.66 
 
 		 205 aa  155  5.0000000000000005e-37  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal  1 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  47 
 
 		 208 aa  154  7e-37  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  42.5 
 
 		 198 aa  150  2e-35  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  49.5 
 
 		 200 aa  149  3e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  40.5 
 
 		 198 aa  144  6e-34  Shewanella woodyi ATCC 51908  Bacteria  normal  1  unclonable  0.00000001788 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  44.28 
 
 		 202 aa  141  6e-33  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal  1 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  36.68 
 
 		 205 aa  135  6.0000000000000005e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  41.63 
 
 		 215 aa  134  7.000000000000001e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  38 
 
 		 200 aa  134  9.999999999999999e-31  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.33 
 
 		 216 aa  133  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  41 
 
 		 198 aa  132  3e-30  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  41 
 
 		 198 aa  132  3e-30  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  41 
 
 		 198 aa  132  5e-30  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_7316  response regulator receiver protein  44.28 
 
 		 201 aa  131  6e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  40.5 
 
 		 198 aa  130  1.0000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  41 
 
 		 198 aa  130  2.0000000000000002e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  39.9 
 
 		 222 aa  129  2.0000000000000002e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  32.38 
 
 		 216 aa  129  3e-29  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  34.87 
 
 		 208 aa  129  4.0000000000000003e-29  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6814  response regulator receiver protein  56.59 
 
 		 159 aa  128  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  41.09 
 
 		 226 aa  127  9.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  41 
 
 		 198 aa  127  1.0000000000000001e-28  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  39.8 
 
 		 212 aa  127  1.0000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  40.1 
 
 		 218 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  39.71 
 
 		 207 aa  126  2.0000000000000002e-28  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  41 
 
 		 198 aa  126  2.0000000000000002e-28  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  41 
 
 		 198 aa  126  2.0000000000000002e-28  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  37.98 
 
 		 220 aa  126  2.0000000000000002e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  40.19 
 
 		 220 aa  127  2.0000000000000002e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  36.84 
 
 		 216 aa  126  3e-28  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  34.33 
 
 		 209 aa  125  4.0000000000000003e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  40.47 
 
 		 220 aa  125  5e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  40.93 
 
 		 217 aa  125  5e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  36.19 
 
 		 216 aa  125  6e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.82 
 
 		 213 aa  124  7e-28  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  38 
 
 		 212 aa  124  8.000000000000001e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.23 
 
 		 213 aa  124  9e-28  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  39.53 
 
 		 221 aa  124  1e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  37.85 
 
 		 219 aa  124  1e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.65 
 
 		 224 aa  124  1e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  39.81 
 
 		 230 aa  122  2e-27  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  38.73 
 
 		 202 aa  123  2e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  33.98 
 
 		 209 aa  123  2e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
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