Gene Snas_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0503 
Symbol 
ID8881686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp527610 
End bp528218 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content74% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003509311 
Protein GI291298033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.900292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCC GGATCCTGGT GGCCGACGAC GAGGCCATGC TGCGCGGCGC CCTGGTGGCG 
CTGCTCGACC TCGAATCCGA CCTCGACGTC GTCGCCGAGG TGGACACGAG CACCGCCGCG
GTCACGGCCA CGGCGGAGTC CCGTCCCGAC ATCGCCGTCC TCGACCTGGA GATGCCGCCC
GCCGACGGCC TGGTCGCCGC CGAACAGATC CTGCGGCAGC CCACGCCGCC GAGGATCGTG
CTGGTCACCC GGCACGCCCG CCCCGGGGTG CTGCGGCGAG CGTTGGCGGC CGGGGTCAGC
GCCTTCGTCC CCAAGACCAC GCCCGCCGAA CGGCTCGCCG AGATCATCCG CGACGTCCAC
TCCGGACGGC GTTACGTCGA TCCGGACATC GCCGCCTCGG CGCTCACCGA GGACGAGTGC
CCGCTGACCA CCCGGGAACT GGAGGTGCTG CGGGCGGCCC GCACCGGCGC CTCGATCGCC
GACATCGCCG CGGCGGTGCA TCTGGCGCCC GGGACGGTGC GCAACTACCT GTCCTCGGCG
ATGACGAAGC TCGGCGTCTC CTCCCGGCAC GCCGCGGCCC ACGCCGCCTG GGAGCAGGGC
TGGATCTGA
 
Protein sequence
MTIRILVADD EAMLRGALVA LLDLESDLDV VAEVDTSTAA VTATAESRPD IAVLDLEMPP 
ADGLVAAEQI LRQPTPPRIV LVTRHARPGV LRRALAAGVS AFVPKTTPAE RLAEIIRDVH
SGRRYVDPDI AASALTEDEC PLTTRELEVL RAARTGASIA DIAAAVHLAP GTVRNYLSSA
MTKLGVSSRH AAAHAAWEQG WI