Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0322 |
Symbol | |
ID | 4257008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 356195 |
End bp | 356791 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120928 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_736383 |
Protein GI | 114045833 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATTC TTCTCGCGGA AGATCAGGCC ATGGTGCGCG GCGCGCTCGC AGCACTGTTA ACCCTAGCTG GCGGTTTTAC CATTACCCAA GCCAGCAATG GCGATGAAGC CTTAAACCTG CTGAAACAAC AAGATTTCGA TCTACTGCTG ACAGATATCG AAATGCCGGG AAGAACAGGT TTGGAGTTGG CAACTTGGCT TAAGGAACAG CATAGCCATA CCAAGGTCGT GGTTATTACC ACCTTCGGCC GCGCAGGTTA TATTAAACGC GCCATTGAAG CAGGCGTGGG TGGCTTTTTA CTAAAAGATG CGCCCTCGGA AACCTTAGTC CATGCCATTC AACAAGTGAT TGCGGGTAAG CGGATTATCG ATCCTGAGCT GGCAATGATG GCGATTGGCG ATGTCGACCC TCTCAATGAT AAAGAGCGCC GCGCCCTACG TTTTGCCAGT GAAGGCAAAT CCACCGCCGA GATAGCCGAG ATGCTGTTTA TTGCCGAAGG CACGGTACGT AACTATTTAT CCGAAGCCAT TGCCAAACTC AATGCGAGCA ACCGAATCGA TGCCGCCCGC ATCGCCAAGC AAAAAGGTTG GTTATAG
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Protein sequence | MHILLAEDQA MVRGALAALL TLAGGFTITQ ASNGDEALNL LKQQDFDLLL TDIEMPGRTG LELATWLKEQ HSHTKVVVIT TFGRAGYIKR AIEAGVGGFL LKDAPSETLV HAIQQVIAGK RIIDPELAMM AIGDVDPLND KERRALRFAS EGKSTAEIAE MLFIAEGTVR NYLSEAIAKL NASNRIDAAR IAKQKGWL
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