More than 300 homologs were found in PanDaTox collection
for query gene Shewmr7_0322 on replicon NC_008322
Organism: Shewanella sp. MR-7



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  100 
 
 		 198 aa  399  9.999999999999999e-111  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  98.99 
 
 		 198 aa  394  1e-109  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  98.99 
 
 		 198 aa  394  1e-109  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  93.94 
 
 		 198 aa  350  7e-96  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  92.93 
 
 		 198 aa  345  2e-94  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  92.93 
 
 		 198 aa  345  2e-94  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  92.93 
 
 		 198 aa  345  4e-94  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  92.42 
 
 		 198 aa  343  8e-94  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  80.3 
 
 		 198 aa  323  7e-88  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  75.76 
 
 		 198 aa  312  1.9999999999999998e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  1  unclonable  0.00000001788 
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  75.85 
 
 		 207 aa  307  5e-83  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  74.75 
 
 		 202 aa  291  5e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  59.31 
 
 		 205 aa  238  4e-62  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal  1 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  55.78 
 
 		 200 aa  217  7.999999999999999e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  54.55 
 
 		 205 aa  211  3.9999999999999995e-54  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  50.25 
 
 		 200 aa  201  5e-51  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  57.56 
 
 		 200 aa  200  9.999999999999999e-51  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.86401 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  51.76 
 
 		 202 aa  199  3e-50  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  49.25 
 
 		 200 aa  194  5.000000000000001e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  49.25 
 
 		 200 aa  194  1e-48  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  49.25 
 
 		 200 aa  193  1e-48  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  49.25 
 
 		 200 aa  193  2e-48  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  48.74 
 
 		 200 aa  191  7e-48  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  48.74 
 
 		 200 aa  191  7e-48  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  48.74 
 
 		 200 aa  191  7e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  48.24 
 
 		 200 aa  190  9e-48  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  48.74 
 
 		 200 aa  190  1e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  48.74 
 
 		 200 aa  190  1e-47  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  54.27 
 
 		 200 aa  189  2.9999999999999997e-47  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  48.26 
 
 		 197 aa  183  2.0000000000000003e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal  1 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  48.26 
 
 		 201 aa  177  7e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  46.73 
 
 		 208 aa  177  9e-44  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  49.75 
 
 		 201 aa  177  1e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.264232 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  47.47 
 
 		 201 aa  176  3e-43  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  46.77 
 
 		 208 aa  174  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.313515 
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  45.27 
 
 		 204 aa  174  8e-43  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  47 
 
 		 205 aa  174  9e-43  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.116105 
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  46.5 
 
 		 201 aa  172  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.226774 
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  43.22 
 
 		 200 aa  172  1.9999999999999998e-42  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  44.78 
 
 		 203 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  47.5 
 
 		 201 aa  171  9e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0367887 
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  46 
 
 		 223 aa  169  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  43 
 
 		 212 aa  168  5e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_013235  Namu_2610  two component transcriptional regulator, LuxR family  57.64 
 
 		 144 aa  167  9e-41  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000438854  normal  0.0112001 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.27 
 
 		 224 aa  164  1.0000000000000001e-39  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  46.04 
 
 		 201 aa  162  3e-39  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.71 
 
 		 201 aa  162  3e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal  1 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  43.28 
 
 		 201 aa  161  7e-39  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  45 
 
 		 197 aa  161  7e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.516841 
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  44.22 
 
 		 200 aa  160  2e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.71 
 
 		 211 aa  160  2e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  44.28 
 
 		 202 aa  158  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.524184 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  40 
 
 		 205 aa  157  8e-38  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  43 
 
 		 201 aa  154  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal  1 
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  43.56 
 
 		 204 aa  154  8e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal  1 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  44 
 
 		 201 aa  153  1e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  40.5 
 
 		 201 aa  152  2.9999999999999998e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  43 
 
 		 200 aa  151  5e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  40.1 
 
 		 200 aa  151  5.9999999999999996e-36  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000320378  n/a   
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  40.1 
 
 		 200 aa  151  5.9999999999999996e-36  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41 
 
 		 204 aa  150  1e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  42.21 
 
 		 200 aa  149  4e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal  1 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  41 
 
 		 201 aa  147  1.0000000000000001e-34  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal  1 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  38 
 
 		 227 aa  145  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  46.07 
 
 		 190 aa  144  6e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  42.93 
 
 		 201 aa  144  7.0000000000000006e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.207018 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.5 
 
 		 203 aa  144  9e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal  1 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  41 
 
 		 201 aa  141  7e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  40 
 
 		 200 aa  138  6e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  38.07 
 
 		 200 aa  137  1e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_002976  SERP0889  LuxR family DNA-binding response regulator  32.66 
 
 		 200 aa  137  1e-31  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000916195  n/a   
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  37 
 
 		 201 aa  137  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0345388 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  39.5 
 
 		 201 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.053163 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  39.51 
 
 		 206 aa  136  3.0000000000000003e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38 
 
 		 200 aa  133  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal  1 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  38.5 
 
 		 202 aa  128  5.0000000000000004e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.900292 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  41 
 
 		 201 aa  125  3e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  34.27 
 
 		 220 aa  125  5e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  38.5 
 
 		 200 aa  124  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  37.02 
 
 		 218 aa  122  3e-27  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  35.1 
 
 		 216 aa  122  4e-27  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  33.67 
 
 		 211 aa  122  5e-27  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  35.42 
 
 		 219 aa  120  9.999999999999999e-27  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  35.71 
 
 		 208 aa  119  3.9999999999999996e-26  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.62 
 
 		 232 aa  119  3.9999999999999996e-26  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  32.41 
 
 		 225 aa  118  4.9999999999999996e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.06 
 
 		 222 aa  118  6e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.81 
 
 		 232 aa  117  9.999999999999999e-26  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  34.87 
 
 		 216 aa  117  9.999999999999999e-26  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  34.87 
 
 		 216 aa  117  9.999999999999999e-26  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000399601  n/a   
 
 
-
 
NC_009665  Shew185_1285  two component LuxR family transcriptional regulator  34.87 
 
 		 216 aa  117  9.999999999999999e-26  Shewanella baltica OS185  Bacteria  decreased coverage  0.000337392  n/a   
 
 
-
 
NC_008322  Shewmr7_1222  two component LuxR family transcriptional regulator  35.05 
 
 		 225 aa  116  1.9999999999999998e-25  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  34.87 
 
 		 216 aa  116  1.9999999999999998e-25  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_008577  Shewana3_1152  two component LuxR family transcriptional regulator  36.6 
 
 		 225 aa  115  3e-25  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  34.62 
 
 		 220 aa  116  3e-25  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  32.7 
 
 		 218 aa  116  3e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  32.85 
 
 		 222 aa  115  3.9999999999999997e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1151  two component LuxR family transcriptional regulator  37.63 
 
 		 225 aa  115  3.9999999999999997e-25  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  35.1 
 
 		 218 aa  115  3.9999999999999997e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  31.75 
 
 		 231 aa  115  5e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>