More than 300 homologs were found in PanDaTox collection
for query gene Swoo_4591 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  100 
 
 
198 aa  399  9.999999999999999e-111  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.00000001788 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  83.33 
 
 
198 aa  336  9.999999999999999e-92  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  77.78 
 
 
198 aa  298  2e-80  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  77.78 
 
 
198 aa  298  2e-80  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  77.27 
 
 
198 aa  297  6e-80  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  77.27 
 
 
198 aa  296  1e-79  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  77.27 
 
 
198 aa  296  2e-79  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  76.26 
 
 
198 aa  295  2e-79  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  76.26 
 
 
198 aa  295  2e-79  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  76.73 
 
 
202 aa  294  5e-79  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  75.76 
 
 
198 aa  294  6e-79  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  71.5 
 
 
207 aa  285  2.9999999999999996e-76  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  58.82 
 
 
205 aa  234  9e-61  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  56.78 
 
 
200 aa  221  4.9999999999999996e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  51.76 
 
 
200 aa  207  1e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  53.03 
 
 
205 aa  206  1e-52  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  57.79 
 
 
200 aa  204  5e-52  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86401 
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  50.25 
 
 
200 aa  199  1.9999999999999998e-50  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  56.28 
 
 
200 aa  199  1.9999999999999998e-50  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  50.75 
 
 
200 aa  199  1.9999999999999998e-50  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  50.75 
 
 
200 aa  199  3e-50  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  50.25 
 
 
200 aa  197  6e-50  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  50.25 
 
 
200 aa  197  1.0000000000000001e-49  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  49.75 
 
 
200 aa  197  1.0000000000000001e-49  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  50.25 
 
 
200 aa  197  1.0000000000000001e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  49.75 
 
 
200 aa  196  2.0000000000000003e-49  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  50.25 
 
 
200 aa  196  3e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  50.25 
 
 
200 aa  196  3e-49  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  51.27 
 
 
202 aa  196  3e-49  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  48 
 
 
197 aa  188  5e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  48.76 
 
 
208 aa  186  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.313515 
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  45.27 
 
 
204 aa  179  2e-44  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  47.26 
 
 
201 aa  178  4e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  46 
 
 
201 aa  177  9e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.226774 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  47.98 
 
 
201 aa  176  2e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  45.5 
 
 
205 aa  175  3e-43  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.116105 
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  44.78 
 
 
203 aa  174  9e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  46.5 
 
 
223 aa  173  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  48 
 
 
201 aa  173  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0367887 
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  45.73 
 
 
212 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  47.52 
 
 
201 aa  173  1.9999999999999998e-42  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.264232 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  43 
 
 
205 aa  172  3.9999999999999995e-42  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  46.77 
 
 
201 aa  171  5.999999999999999e-42  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  46.23 
 
 
200 aa  171  9e-42  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.18 
 
 
211 aa  169  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  44.78 
 
 
197 aa  167  7e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  44.22 
 
 
208 aa  167  8e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  41.71 
 
 
200 aa  167  9e-41  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_013235  Namu_2610  two component transcriptional regulator, LuxR family  55.56 
 
 
144 aa  165  4e-40  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000438854  normal  0.0112001 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.28 
 
 
224 aa  165  4e-40  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.71 
 
 
201 aa  162  3e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  43.78 
 
 
202 aa  160  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  41 
 
 
201 aa  159  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  42.71 
 
 
200 aa  159  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  43 
 
 
201 aa  158  6e-38  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  43.56 
 
 
204 aa  157  8e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  43.28 
 
 
201 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42 
 
 
204 aa  156  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  43 
 
 
201 aa  155  5.0000000000000005e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  44 
 
 
200 aa  153  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  40.5 
 
 
201 aa  153  1e-36  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40 
 
 
200 aa  149  2e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.5 
 
 
203 aa  147  8e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  40.5 
 
 
200 aa  147  1.0000000000000001e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  44.5 
 
 
190 aa  147  1.0000000000000001e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  41.21 
 
 
201 aa  147  1.0000000000000001e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  38.89 
 
 
227 aa  147  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  37.56 
 
 
200 aa  144  9e-34  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000320378  n/a   
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  37.56 
 
 
200 aa  144  9e-34  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  41.5 
 
 
201 aa  142  3e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  38.58 
 
 
200 aa  142  4e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  40 
 
 
201 aa  141  5e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.053163 
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  38 
 
 
201 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0345388 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  38.5 
 
 
202 aa  137  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_002976  SERP0889  LuxR family DNA-binding response regulator  32.49 
 
 
200 aa  133  1.9999999999999998e-30  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000916195  n/a   
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  37.44 
 
 
206 aa  132  3e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  36.15 
 
 
220 aa  130  2.0000000000000002e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  36.97 
 
 
216 aa  129  3e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  38.46 
 
 
216 aa  128  6e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  35.5 
 
 
204 aa  127  9.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  40.5 
 
 
201 aa  126  2.0000000000000002e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  36.45 
 
 
219 aa  126  2.0000000000000002e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  39.5 
 
 
200 aa  126  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  37.98 
 
 
217 aa  125  4.0000000000000003e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  35.51 
 
 
226 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  35.89 
 
 
218 aa  124  9e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  33.96 
 
 
215 aa  123  2e-27  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  33 
 
 
234 aa  122  3e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  34.98 
 
 
212 aa  122  4e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  35.96 
 
 
207 aa  122  4e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  34.86 
 
 
231 aa  121  8e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  33.5 
 
 
211 aa  120  9.999999999999999e-27  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  33.82 
 
 
213 aa  119  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  36.04 
 
 
219 aa  120  1.9999999999999998e-26  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  33.64 
 
 
234 aa  120  1.9999999999999998e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  35.71 
 
 
216 aa  119  1.9999999999999998e-26  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000399601  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  33.8 
 
 
225 aa  119  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  34.58 
 
 
220 aa  119  3e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  35.71 
 
 
216 aa  119  3e-26  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  36.73 
 
 
216 aa  119  3e-26  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
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