Gene SO_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0351 
Symbol 
ID1168228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp358578 
End bp359174 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content52% 
IMG OID637342355 
ProductLuxR family DNA-binding response regulator 
Protein accessionNP_715991 
Protein GI24371949 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTC TATTGGCGGA AGATCAAGCC ATGGTGCGCG GCGCACTGGC GGCACTGTTA 
ACCCTTGCTG GCGGTTTTAC CATTACCCAA GCCAGCGATG GCGACGAAGC ATTAACCCTT 
CTCAAACAAC AGCATTTTGA CCTGTTACTG ACGGATATTG AAATGCCGGG ACGAACAGGT 
TTGGAGCTAG CCGCTTGGCT AAAGGAGCAG CACAGCCAAA CCAAAGTGGT GGTGATCACG 
ACTTTTGGCC GCGCGGGTTA CATTAAACGC GCTATCGAAG CGGGTGTCGG TGGATTTTTG 
CTAAAAGATG CGCCCTCAGA AACCCTAGTC AGTTCAATTC AACAAGTGAT GGCGGGTAAA 
CGCGTCATCG ATCCTGAGCT TGCCATGATG GCAATTGGTG ATATCGACCC CCTCAATGAT 
AAAGAACGCC GCGCCTTACG GTTTGCCAGC GAAGGCAAAT CCACCGCCGA AATTGCCGAC 
ATGCTCTTTA TTGCCGAAGG CACTGTTCGT AACTATCTAT CCGAGGCCAT CGCCAAACTC 
AATGCGAGCA ACCGAATCGA TGCTGCCCGC ATCGCAAAGC AAAAGGGTTG GCTGTAG
 
Protein sequence
MKILLAEDQA MVRGALAALL TLAGGFTITQ ASDGDEALTL LKQQHFDLLL TDIEMPGRTG 
LELAAWLKEQ HSQTKVVVIT TFGRAGYIKR AIEAGVGGFL LKDAPSETLV SSIQQVMAGK 
RVIDPELAMM AIGDIDPLND KERRALRFAS EGKSTAEIAD MLFIAEGTVR NYLSEAIAKL 
NASNRIDAAR IAKQKGWL