Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0889 |
Symbol | |
ID | 3242649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 901943 |
End bp | 902545 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167546 |
Product | LuxR family DNA-binding response regulator |
Protein accession | YP_188469 |
Protein GI | 57866798 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000916195 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCGC TTGTCATAAC TGAGGATCAA TTGATGTTAA GAAAAGCTAT GGTACAACTG ATAGAAATGC ATGAAGAAAT GAATGTATTA AAAGATTTTG AAAATGGTCT AGAGACACTC GAATTTATTG AAAATAATGA ACCCAATGTA GCCATTTTAG ATATTGAAAT TCCGGGTATA ACAGGCTTGG AAATCTTATC TTATGTAAGA AAAAAACAAC TCAATACAAG AATAATCATA GTGACTACAT TTAAACGTCC AGGTTATTTT GAAAAAGCTG TAGCAAATGA TGTTGATGCT TATGTACTAA AAGAGCGTTC AATTGATGAT TTAATTAAAA CTATTTATAA AGTGACAAAG GGTGAGAAGG AATATAGCCC TTCACTCATG ACATCATTGT TTACCGAATC GAATCCATTA ACTCATAAAG AACAAGTTGT TTTAAGAGAA ATAGGCAATG GGTTAAGTAG CAAAGAGATT GCTAGCAAAT TGTATTTATC GAACGGGACT GTGCGTAACT ATACGAGTAC TATTATAGAC AAAATGAATT CAGATCATCG TTTTGAGGCA TGGAAAAAAG CAAATGAAAA GGGGTGGATT TAA
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Protein sequence | MISLVITEDQ LMLRKAMVQL IEMHEEMNVL KDFENGLETL EFIENNEPNV AILDIEIPGI TGLEILSYVR KKQLNTRIII VTTFKRPGYF EKAVANDVDA YVLKERSIDD LIKTIYKVTK GEKEYSPSLM TSLFTESNPL THKEQVVLRE IGNGLSSKEI ASKLYLSNGT VRNYTSTIID KMNSDHRFEA WKKANEKGWI
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