Gene Franean1_6814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6814 
Symbol 
ID5675127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8303353 
End bp8303832 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content75% 
IMG OID641245663 
Productresponse regulator receiver protein 
Protein accessionYP_001511054 
Protein GI158318546 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCC AGAGCGAGCT CGCCGCACGC CTGGTCGAGC ACGGAGACGC TGCCGCGGCG 
GAACGCATGC TGGAGGTTCG CCAGGTCGCC CACGACTCGC TGCGCGAGAT GCGCGCGGTT
GTCGACGGCT ACCGCCGGGC CGACCTGGGC GCGGAGCTCG CCGGCGCCCG GGCGATGCGC
GCCGAGGTCC CCGGATGCGC CAACGTGATC GTGACCAGCC ACGGACGTCC CGGTTATCTC
AAGCAGGCGC TCGCGGCGGG GGCGTGCGGC TTCCTTCCGA AGACCGTCTC CGCGCAGGTC
CTCGCCGACG TGGTCCGGGC GGTGCACGGC GGCGGCCGCT ACGTGGACCC GGAGCTGGCC
GCGGAGGCGA TCGCGGCCGG AGAGAGCCCG TTGACCTCGC GTGAGGCCGA GGTCCTCGAG
CTGGGCGCCG TCAACCGGCA CGAGGCCGTC CAGCTCGCCC GCGCCCGCGG CTGGATCTGA
 
Protein sequence
MAVQSELAAR LVEHGDAAAA ERMLEVRQVA HDSLREMRAV VDGYRRADLG AELAGARAMR 
AEVPGCANVI VTSHGRPGYL KQALAAGACG FLPKTVSAQV LADVVRAVHG GGRYVDPELA
AEAIAAGESP LTSREAEVLE LGAVNRHEAV QLARARGWI