112 homologs were found in PanDaTox collection
for query gene Dgeo_0425 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008025  Dgeo_0425  Holliday junction resolvase YqgF  100 
 
 		 232 aa  467  1.0000000000000001e-131  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.585782  normal  1 
 
 
-
 
NC_013946  Mrub_2951  Holliday junction resolvase YqgF  41.48 
 
 		 136 aa  79  0.00000000000006  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0224  Holliday junction resolvase YqgF  42.22 
 
 		 135 aa  70.1  0.00000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.776353  normal  0.0108713 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  38.41 
 
 		 140 aa  60.1  0.00000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  37.14 
 
 		 153 aa  57.8  0.0000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  37.96 
 
 		 146 aa  57.8  0.0000001  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  31.54 
 
 		 139 aa  57.4  0.0000002  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_009718  Fnod_0335  Holliday junction resolvase YqgF  29.06 
 
 		 226 aa  54.7  0.000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  33.85 
 
 		 141 aa  54.7  0.000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_007794  Saro_0906  Holliday junction resolvase-like protein  33.02 
 
 		 155 aa  53.9  0.000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.167999  n/a   
 
 
-
 
NC_008048  Sala_0925  Holliday junction resolvase YqgF  36.96 
 
 		 152 aa  52.8  0.000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.233016  normal  1 
 
 
-
 
NC_007908  Rfer_1378  Holliday junction resolvase-like protein  33.85 
 
 		 156 aa  52.4  0.000006  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  34.06 
 
 		 141 aa  52.4  0.000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  31.3 
 
 		 137 aa  50.1  0.00003  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  31.3 
 
 		 137 aa  50.1  0.00003  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  32.56 
 
 		 150 aa  49.7  0.00004  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  34.62 
 
 		 222 aa  48.5  0.00008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  32.84 
 
 		 140 aa  48.5  0.00009  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  32.84 
 
 		 140 aa  48.5  0.00009  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  32.84 
 
 		 140 aa  48.5  0.00009  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  34.92 
 
 		 160 aa  48.1  0.0001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_009616  Tmel_0300  Holliday junction resolvase YqgF  29.66 
 
 		 202 aa  47.8  0.0001  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  31.88 
 
 		 142 aa  47.8  0.0002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  31.82 
 
 		 139 aa  47  0.0002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  31.25 
 
 		 142 aa  47.8  0.0002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  31.82 
 
 		 139 aa  47  0.0002  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0212683 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  35 
 
 		 138 aa  47  0.0002  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  33.09 
 
 		 139 aa  46.6  0.0003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  32.06 
 
 		 163 aa  46.6  0.0004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  36.96 
 
 		 139 aa  46.2  0.0004  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal  1 
 
 
-
 
NC_008740  Maqu_3763  Holliday junction resolvase YqgF  32.33 
 
 		 143 aa  46.6  0.0004  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  29.41 
 
 		 123 aa  46.2  0.0004  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  31.51 
 
 		 143 aa  45.8  0.0006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  32.62 
 
 		 148 aa  45.4  0.0007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0048  Holliday junction resolvase YqgF  38 
 
 		 133 aa  45.1  0.0009  Dehalococcoides sp. BAV1  Bacteria  normal  0.112526  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  33.33 
 
 		 151 aa  45.1  0.001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  30.15 
 
 		 143 aa  44.7  0.001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  35 
 
 		 145 aa  44.7  0.001  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal  1 
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  28.68 
 
 		 139 aa  44.7  0.001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  31.39 
 
 		 141 aa  44.7  0.001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  33.94 
 
 		 143 aa  44.7  0.001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  37.93 
 
 		 161 aa  44.7  0.001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_012791  Vapar_4616  Holliday junction resolvase-like protein  35 
 
 		 153 aa  44.7  0.001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  44.3  0.002  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  31.11 
 
 		 138 aa  44.3  0.002  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_006348  BMA1996  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.9  0.002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.391575  n/a   
 
 
-
 
NC_007434  BURPS1710b_3169  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.9  0.002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  32.39 
 
 		 202 aa  44.3  0.002  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_013889  TK90_2407  Holliday junction resolvase YqgF  32.26 
 
 		 130 aa  44.3  0.002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.664688  normal  0.90932 
 
 
-
 
NC_014148  Plim_0102  Holliday junction resolvase YqgF  29.91 
 
 		 199 aa  43.9  0.002  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0917  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.9  0.002  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2747  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.9  0.002  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_3147  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.9  0.002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.822464  n/a   
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.9  0.002  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  28.47 
 
 		 139 aa  44.3  0.002  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  30 
 
 		 141 aa  43.9  0.002  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_009511  Swit_0601  Holliday junction resolvase YqgF  34.41 
 
 		 151 aa  43.9  0.002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.613999 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  36.84 
 
 		 137 aa  43.9  0.002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.52249 
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  44.3  0.002  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  43.9  0.002  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  30.53 
 
 		 139 aa  43.9  0.002  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  44.3  0.002  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  43.9  0.002  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  27.94 
 
 		 139 aa  43.9  0.002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  43.9  0.002  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  32.31 
 
 		 141 aa  44.3  0.002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  43.9  0.002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  31.34 
 
 		 142 aa  44.3  0.002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  31.54 
 
 		 140 aa  44.3  0.002  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  30.22 
 
 		 139 aa  43.9  0.002  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_012892  B21_02742  hypothetical protein  31.11 
 
 		 138 aa  44.3  0.002  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  33.85 
 
 		 133 aa  43.9  0.002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  31.39 
 
 		 139 aa  43.9  0.002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_002936  DET0051  hypothetical protein  38 
 
 		 133 aa  43.5  0.003  Dehalococcoides ethenogenes 195  Bacteria  normal  0.673741  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  30.82 
 
 		 141 aa  43.1  0.003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  30.15 
 
 		 151 aa  43.5  0.003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  30.82 
 
 		 141 aa  43.5  0.003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  30.82 
 
 		 141 aa  43.5  0.003  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  30.82 
 
 		 141 aa  43.5  0.003  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_009074  BURPS668_3111  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  43.1  0.003  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_1578  Holliday junction resolvase-like protein  29.6 
 
 		 127 aa  43.5  0.003  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  31.3 
 
 		 133 aa  43.1  0.003  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_007643  Rru_A3178  Holliday junction resolvase YqgF  31.25 
 
 		 161 aa  43.1  0.004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.825708  n/a   
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  32.67 
 
 		 158 aa  43.1  0.004  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  30.37 
 
 		 138 aa  43.1  0.004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.392173 
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  30.37 
 
 		 138 aa  43.1  0.004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0744312 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  30.37 
 
 		 138 aa  43.1  0.004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  30.37 
 
 		 138 aa  42.7  0.004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00956364 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  35 
 
 		 139 aa  42.7  0.005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  33.72 
 
 		 141 aa  42.4  0.005  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009436  Ent638_3353  Holliday junction resolvase-like protein  31.11 
 
 		 138 aa  42.7  0.005  Enterobacter sp. 638  Bacteria  normal  0.2584  decreased coverage  0.0020385 
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  33.72 
 
 		 141 aa  42.4  0.005  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  33.72 
 
 		 141 aa  42.4  0.005  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_013552  DhcVS_51  Holliday junction resolvase  38 
 
 		 133 aa  42.7  0.005  Dehalococcoides sp. VS  Bacteria  normal  0.444327  n/a   
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  30.37 
 
 		 138 aa  42.7  0.005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  33.72 
 
 		 141 aa  42.4  0.005  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  32.33 
 
 		 143 aa  42.7  0.005  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  31.15 
 
 		 163 aa  42.4  0.006  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal  1 
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  32.32 
 
 		 151 aa  42.4  0.006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  32.31 
 
 		 149 aa  42.4  0.007  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>