More than 300 homologs were found in PanDaTox collection
for query gene Caul_2068 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_2068  LuxR family transcriptional regulator  100 
 
 
85 aa  171  3.9999999999999995e-42  Caulobacter sp. K31  Bacteria  normal  0.0760064  normal 
 
 
-
 
NC_007794  Saro_2626  two component LuxR family transcriptional regulator  70.77 
 
 
207 aa  93.6  8e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.390788  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  62.9 
 
 
220 aa  85.1  3e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  61.9 
 
 
219 aa  81.3  0.000000000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  63.93 
 
 
219 aa  80.9  0.000000000000006  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  60.32 
 
 
219 aa  80.5  0.000000000000007  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.001499 
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  60.94 
 
 
209 aa  80.5  0.000000000000007  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  62.3 
 
 
238 aa  80.1  0.000000000000009  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  52.78 
 
 
220 aa  80.1  0.00000000000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  52.78 
 
 
220 aa  79.7  0.00000000000001  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  52.78 
 
 
220 aa  80.1  0.00000000000001  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  52.78 
 
 
220 aa  80.1  0.00000000000001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  62.71 
 
 
220 aa  79  0.00000000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  62.71 
 
 
220 aa  79  0.00000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  62.71 
 
 
220 aa  79  0.00000000000002  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  62.71 
 
 
220 aa  79  0.00000000000002  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  60.66 
 
 
220 aa  78.6  0.00000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  64.91 
 
 
220 aa  78.6  0.00000000000003  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  60.32 
 
 
219 aa  78.2  0.00000000000004  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  60.66 
 
 
217 aa  77.8  0.00000000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  60.66 
 
 
217 aa  77.8  0.00000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  54.41 
 
 
217 aa  77  0.00000000000008  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  59.02 
 
 
216 aa  77  0.00000000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.192356 
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  56.06 
 
 
211 aa  76.3  0.0000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  50 
 
 
218 aa  76.6  0.0000000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  59.02 
 
 
221 aa  76.3  0.0000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  53.03 
 
 
221 aa  75.5  0.0000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  53.03 
 
 
221 aa  75.5  0.0000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  47.37 
 
 
210 aa  75.1  0.0000000000003  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  59.02 
 
 
209 aa  75.1  0.0000000000003  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  59.02 
 
 
209 aa  74.7  0.0000000000003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  47.37 
 
 
210 aa  74.7  0.0000000000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  61.82 
 
 
222 aa  74.7  0.0000000000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  59.02 
 
 
215 aa  74.7  0.0000000000004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  60 
 
 
225 aa  74.3  0.0000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  60 
 
 
224 aa  74.3  0.0000000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal 
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  60 
 
 
214 aa  74.3  0.0000000000005  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  50 
 
 
216 aa  74.3  0.0000000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  57.38 
 
 
216 aa  74.3  0.0000000000006  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0994806 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  57.38 
 
 
216 aa  73.9  0.0000000000006  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00000000317123 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  60 
 
 
224 aa  73.9  0.0000000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0588074 
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  60 
 
 
231 aa  74.3  0.0000000000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  57.38 
 
 
216 aa  74.3  0.0000000000006  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  57.38 
 
 
216 aa  73.9  0.0000000000007  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000136895 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  60 
 
 
223 aa  73.9  0.0000000000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  60 
 
 
224 aa  73.9  0.0000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  59.32 
 
 
215 aa  73.6  0.000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  57.63 
 
 
215 aa  72.4  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  60 
 
 
221 aa  71.6  0.000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  58.33 
 
 
219 aa  72  0.000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  57.38 
 
 
215 aa  71.6  0.000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  57.38 
 
 
215 aa  71.2  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  57.63 
 
 
213 aa  71.2  0.000000000004  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  62.96 
 
 
222 aa  71.2  0.000000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2674  two component transcriptional regulator  59.32 
 
 
228 aa  71.6  0.000000000004  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00219271  normal 
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  50 
 
 
213 aa  71.2  0.000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  53.12 
 
 
224 aa  71.2  0.000000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  57.63 
 
 
213 aa  70.5  0.000000000007  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  55 
 
 
214 aa  69.7  0.00000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_009430  Rsph17025_4179  hypothetical protein  45 
 
 
232 aa  69.7  0.00000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.365276 
 
 
-
 
NC_009428  Rsph17025_1932  two component LuxR family transcriptional regulator  53.12 
 
 
236 aa  70.1  0.00000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2591  two component LuxR family transcriptional regulator  53.12 
 
 
235 aa  69.7  0.00000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211381  n/a   
 
 
-
 
NC_009049  Rsph17029_1249  two component LuxR family transcriptional regulator  53.12 
 
 
235 aa  69.7  0.00000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  51.56 
 
 
219 aa  69.3  0.00000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  58.49 
 
 
215 aa  69.3  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.463895 
 
 
-
 
NC_007493  RSP_2882  two component LuxR family transcriptional regulator  60.71 
 
 
226 aa  68.6  0.00000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.533901  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  50.75 
 
 
212 aa  68.9  0.00000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  58.49 
 
 
215 aa  69.3  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1528  two component LuxR family transcriptional regulator  60.71 
 
 
226 aa  68.9  0.00000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0620794 
 
 
-
 
NC_009092  Shew_2614  two component LuxR family transcriptional regulator  50 
 
 
222 aa  68.9  0.00000000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1138  two component LuxR family transcriptional regulator  60.71 
 
 
226 aa  68.6  0.00000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.914207  normal 
 
 
-
 
NC_008686  Pden_2354  two component LuxR family transcriptional regulator  50.82 
 
 
236 aa  68.6  0.00000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.399998  normal 
 
 
-
 
NC_009831  Ssed_3140  two component LuxR family transcriptional regulator  54.24 
 
 
220 aa  68.2  0.00000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.803361  normal  0.270175 
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  52.46 
 
 
218 aa  67.8  0.00000000004  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  54.39 
 
 
229 aa  67.4  0.00000000006  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.190475 
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  54.39 
 
 
214 aa  67  0.00000000008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  54.39 
 
 
214 aa  67  0.00000000008  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  55.17 
 
 
223 aa  67  0.00000000009  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.211294 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  58.93 
 
 
221 aa  66.6  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal 
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  58.93 
 
 
221 aa  66.6  0.0000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  58.93 
 
 
221 aa  66.6  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  normal  0.892266 
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  58.93 
 
 
221 aa  66.2  0.0000000001  Pseudomonas putida F1  Bacteria  normal  0.548338  normal 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  52.46 
 
 
223 aa  66.6  0.0000000001  Shewanella sp. MR-4  Bacteria  normal  normal  0.335218 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  55.17 
 
 
223 aa  66.6  0.0000000001  Shewanella sp. MR-7  Bacteria  normal  normal  0.358413 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  52.46 
 
 
223 aa  66.6  0.0000000001  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  41.77 
 
 
211 aa  65.9  0.0000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  56.6 
 
 
215 aa  65.1  0.0000000003  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  53.33 
 
 
204 aa  65.1  0.0000000003  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  53.45 
 
 
227 aa  64.7  0.0000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  57.14 
 
 
221 aa  65.1  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  57.14 
 
 
221 aa  64.3  0.0000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  48.48 
 
 
229 aa  63.5  0.0000000009  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0937  LuxR family DNA-binding response regulator  49.25 
 
 
223 aa  63.2  0.000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.715087  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  53.23 
 
 
216 aa  63.2  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  48.21 
 
 
239 aa  62.8  0.000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  52.63 
 
 
216 aa  62.4  0.000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  51.85 
 
 
207 aa  61.6  0.000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  52.83 
 
 
241 aa  61.2  0.000000004  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0133592 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  53.45 
 
 
209 aa  61.2  0.000000004  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_010581  Bind_3599  LuxR family transcriptional regulator  44.58 
 
 
235 aa  61.2  0.000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.161431  normal 
 
 
-
 
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