| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2674 |
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| Symbol | |
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| ID | 5713572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2830905 |
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| End bp | 2831591 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268598 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001534008 |
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| Protein GI | 159045214 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00219271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGC CAGTCGCATT CCGAAGCGCG ATGATCGTGG ACGATCATCC CCTCTTTCTC
GATGCGCTCT CCATGACCTT GCGAACGGTC TCCGACATCG ACGAGATCGC GACTGCGGAC
ACGATGGAAT CCGCTCTGTC CCAACTGGAT GGCGCCACAC CGGATGTGAT CGTGCTCGAC
CTGAACCTGC CGGACGTGAA CGGGCTCGAC GGGTTGATCC GGCTCAAGAC CGCTGTCCCC
TCCACCCCGG TGGTGGTCGT CTCGTCCATG GCCGACAACC GGATGATCAC CTCGACCCTG
CGCGTGGGCG CCTCGGGCTT CGTGCCCAAG CACTCCAAGC GCGAAGTCTT CCGCGAAGCC
TTCGACGCGA TCCAGAACGG CACGGTCTTC ACCCCCGAGA ACTACGTGCC CAACACCGAT
GCCGACAGCC CCCAGAACAA CGCCGAGGAA GCGCTCGCAC GGCTCGGCCT GCTGACCAAG
CAGCAGGCCC GCATCCTGCA GCTGATCTGC GCCGGCAAGC TGAACAAGCA GATCGCCTAT
GACCTGTCCA TCGCCGAGAC GACCGTGAAG GCCCATGTCA CCGCGATCAT GCGCAAGCTG
GGGGTCCAGA GCCGGACGCA GGCGGTTTTG ATTGCACAGG AGGCGAATTT CGCCAATTTT
GTGGCGAGCG ACAATACGTT GGCCTGA
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| Protein sequence | MTSPVAFRSA MIVDDHPLFL DALSMTLRTV SDIDEIATAD TMESALSQLD GATPDVIVLD
LNLPDVNGLD GLIRLKTAVP STPVVVVSSM ADNRMITSTL RVGASGFVPK HSKREVFREA
FDAIQNGTVF TPENYVPNTD ADSPQNNAEE ALARLGLLTK QQARILQLIC AGKLNKQIAY
DLSIAETTVK AHVTAIMRKL GVQSRTQAVL IAQEANFANF VASDNTLA
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