More than 300 homologs were found in PanDaTox collection
for query gene Caci_5035 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_5035  short-chain dehydrogenase/reductase SDR  100 
 
 
249 aa  508  1e-143  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7619  short chain oxidoreductase  52.07 
 
 
244 aa  236  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.493234  normal  0.169233 
 
 
-
 
NC_013131  Caci_6086  short-chain dehydrogenase/reductase SDR  50.21 
 
 
231 aa  199  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0836078 
 
 
-
 
NC_009487  SaurJH9_2601  short-chain dehydrogenase/reductase SDR  44.77 
 
 
234 aa  198  7e-50  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2655  short-chain dehydrogenase/reductase SDR  44.77 
 
 
234 aa  198  7e-50  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4034  short-chain dehydrogenase/reductase SDR  49.38 
 
 
231 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.376795 
 
 
-
 
NC_013530  Xcel_3154  short-chain dehydrogenase/reductase SDR  45.87 
 
 
232 aa  183  2.0000000000000003e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4589  short-chain dehydrogenase/reductase SDR  42.57 
 
 
237 aa  179  2.9999999999999997e-44  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0285855 
 
 
-
 
NC_013131  Caci_5902  short-chain dehydrogenase/reductase SDR  41.3 
 
 
241 aa  163  3e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2451  short-chain dehydrogenase/reductase SDR  41.9 
 
 
241 aa  162  3e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.409582  normal 
 
 
-
 
NC_013730  Slin_2770  short-chain dehydrogenase/reductase SDR  40.76 
 
 
260 aa  161  1e-38  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5413  short-chain dehydrogenase/reductase SDR  41.35 
 
 
245 aa  157  1e-37  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.0000000035289  normal 
 
 
-
 
NC_013947  Snas_1762  short-chain dehydrogenase/reductase SDR  43.16 
 
 
251 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.350436  normal  0.454063 
 
 
-
 
NC_013093  Amir_0855  short-chain dehydrogenase/reductase SDR  40.78 
 
 
247 aa  155  4e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.5116  n/a   
 
 
-
 
NC_013093  Amir_5128  short-chain dehydrogenase/reductase SDR  39.84 
 
 
270 aa  155  5.0000000000000005e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0664  short-chain dehydrogenase/reductase SDR  37.9 
 
 
244 aa  155  5.0000000000000005e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.120829  normal  0.282186 
 
 
-
 
NC_010676  Bphyt_6333  short-chain dehydrogenase/reductase SDR  40.15 
 
 
252 aa  155  6e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  0.519755  normal 
 
 
-
 
NC_007951  Bxe_A2677  putative short-chain dehydrogenase/oxidoreductase  39.44 
 
 
245 aa  153  2e-36  Burkholderia xenovorans LB400  Bacteria  normal  0.334903  normal 
 
 
-
 
NC_009441  Fjoh_0474  short-chain dehydrogenase/reductase SDR  37.29 
 
 
246 aa  152  2.9999999999999998e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2190  short-chain dehydrogenase/reductase SDR  42.45 
 
 
263 aa  152  2.9999999999999998e-36  Salinispora tropica CNB-440  Bacteria  normal  0.230027  normal 
 
 
-
 
NC_013132  Cpin_4618  short-chain dehydrogenase/reductase SDR  39.57 
 
 
245 aa  149  3e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.978262  normal  0.20317 
 
 
-
 
NC_013132  Cpin_5665  short-chain dehydrogenase/reductase SDR  36.19 
 
 
257 aa  147  1.0000000000000001e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.135845  normal 
 
 
-
 
NC_010338  Caul_2869  short-chain dehydrogenase/reductase SDR  38.11 
 
 
250 aa  147  1.0000000000000001e-34  Caulobacter sp. K31  Bacteria  normal  normal  0.0227742 
 
 
-
 
NC_007413  Ava_0980  Short-chain dehydrogenase/reductase SDR  38.43 
 
 
238 aa  147  2.0000000000000003e-34  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000000633587  normal 
 
 
-
 
NC_011071  Smal_1569  short-chain dehydrogenase/reductase SDR  37.55 
 
 
245 aa  146  4.0000000000000006e-34  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1054  short-chain dehydrogenase/reductase SDR  36.69 
 
 
242 aa  145  5e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.582501 
 
 
-
 
NC_013132  Cpin_5380  short-chain dehydrogenase/reductase SDR  38.98 
 
 
246 aa  143  3e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0146  short-chain dehydrogenase/reductase SDR  37.35 
 
 
244 aa  137  2e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6143  short-chain dehydrogenase/reductase SDR  36.44 
 
 
272 aa  137  2e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.684326  normal 
 
 
-
 
NC_011884  Cyan7425_0352  short-chain dehydrogenase/reductase SDR  37.25 
 
 
239 aa  136  3.0000000000000003e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.512494 
 
 
-
 
NC_014210  Ndas_2522  short-chain dehydrogenase/reductase SDR  39.09 
 
 
250 aa  135  5e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.886047  decreased coverage  0.000126478 
 
 
-
 
NC_009441  Fjoh_3828  short-chain dehydrogenase/reductase SDR  37.94 
 
 
246 aa  134  9e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_06450  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  39.52 
 
 
240 aa  134  9.999999999999999e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4758  short-chain dehydrogenase/reductase SDR  41.08 
 
 
227 aa  131  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0199  short-chain dehydrogenase/reductase SDR  36.65 
 
 
237 aa  129  4.0000000000000003e-29  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.735027 
 
 
-
 
BN001304  ANIA_07268  short chain dehydrogenase/reductase, putative (AFU_orthologue; AFUA_7G00840)  35.08 
 
 
245 aa  128  9.000000000000001e-29  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.886513 
 
 
-
 
NC_014248  Aazo_3598  short-chain dehydrogenase/reductase SDR  34.9 
 
 
238 aa  127  2.0000000000000002e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1765  short-chain dehydrogenase/reductase SDR  34.78 
 
 
237 aa  127  2.0000000000000002e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0513  short-chain dehydrogenase/reductase SDR  36.4 
 
 
233 aa  127  2.0000000000000002e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0814  putative short-chain dehydrogenase/reductase  36.25 
 
 
257 aa  126  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.968056 
 
 
-
 
NC_007413  Ava_2801  Short-chain dehydrogenase/reductase SDR  31.52 
 
 
248 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6522  short-chain dehydrogenase/reductase SDR  36.48 
 
 
229 aa  120  1.9999999999999998e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0516  short-chain dehydrogenase/reductase SDR  38 
 
 
244 aa  119  4.9999999999999996e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0535711  normal 
 
 
-
 
NC_011725  BCB4264_A1782  short chain dehydrogenase  31.43 
 
 
236 aa  119  4.9999999999999996e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1616  short chain dehydrogenase  31.43 
 
 
236 aa  118  7.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.124879  n/a   
 
 
-
 
NC_011773  BCAH820_1818  short chain dehydrogenase  31.43 
 
 
236 aa  118  7.999999999999999e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007802  Jann_1322  short-chain dehydrogenase/reductase SDR  38.02 
 
 
229 aa  116  3e-25  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3562  short chain dehydrogenase  30.61 
 
 
236 aa  115  5e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
BN001307  ANIA_02369  short chain dehydrogenase family protein, putative (AFU_orthologue; AFUA_3G15350)  34.94 
 
 
309 aa  115  6.9999999999999995e-25  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.406317 
 
 
-
 
NC_011365  Gdia_0498  short-chain dehydrogenase/reductase SDR  33.33 
 
 
250 aa  114  1.0000000000000001e-24  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0163958 
 
 
-
 
NC_008528  OEOE_0396  carbonyl reductase  31.3 
 
 
243 aa  114  2.0000000000000002e-24  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2390  short-chain dehydrogenase/reductase SDR  41.63 
 
 
236 aa  109  5e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0167749  n/a   
 
 
-
 
NC_013440  Hoch_4302  short-chain dehydrogenase/reductase SDR  33.45 
 
 
265 aa  105  7e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.729821 
 
 
-
 
NC_013947  Snas_5559  short-chain dehydrogenase/reductase SDR  38.8 
 
 
240 aa  105  1e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1084  short-chain dehydrogenase/reductase SDR  29.53 
 
 
248 aa  101  1e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
BN001308  ANIA_00525  conserved hypothetical protein  30.59 
 
 
263 aa  100  2e-20  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.30588 
 
 
-
 
NC_008340  Mlg_1322  short-chain dehydrogenase/reductase SDR  31.87 
 
 
239 aa  99.8  4e-20  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.475837  normal 
 
 
-
 
NC_011138  MADE_01679  20-beta-hydroxysteroid dehydrogenase  32.67 
 
 
242 aa  97.1  3e-19  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.774728  n/a   
 
 
-
 
NC_011891  A2cp1_2758  short-chain dehydrogenase/reductase SDR  35.71 
 
 
236 aa  92.8  5e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2663  short-chain dehydrogenase/reductase SDR  35.29 
 
 
236 aa  91.7  1e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.0497428  n/a   
 
 
-
 
NC_010172  Mext_1321  short-chain dehydrogenase/reductase SDR  33.52 
 
 
271 aa  90.1  3e-17  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.318083 
 
 
-
 
NC_007760  Adeh_1207  short-chain dehydrogenase/reductase SDR  36.13 
 
 
236 aa  88.6  8e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.827556  n/a   
 
 
-
 
NC_008527  LACR_0069  Short-chain dehydrogenase of various substrate specificities  35.21 
 
 
277 aa  88.6  9e-17  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.367303  n/a   
 
 
-
 
NC_009832  Spro_4120  short-chain dehydrogenase/reductase SDR  31.84 
 
 
250 aa  87.8  1e-16  Serratia proteamaculans 568  Bacteria  normal  0.323528  normal 
 
 
-
 
NC_013595  Sros_2081  short-chain dehydrogenase/reductase SDR  33.8 
 
 
260 aa  88.2  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.379733  normal  0.717658 
 
 
-
 
NC_013131  Caci_0413  short-chain dehydrogenase/reductase SDR  35.02 
 
 
243 aa  87  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0493  short-chain dehydrogenase/reductase SDR  39.58 
 
 
250 aa  87  2e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0141  carbonyl reductase  32.87 
 
 
245 aa  87  2e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_1321  short-chain dehydrogenase/reductase SDR  28.38 
 
 
276 aa  86.7  3e-16  Nitrosopumilus maritimus SCM1  Archaea  n/a    decreased coverage  0.00000000000224332 
 
 
-
 
NC_011894  Mnod_6445  short-chain dehydrogenase/reductase SDR  39.55 
 
 
275 aa  87  3e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0398  short-chain dehydrogenase/reductase SDR  30.85 
 
 
250 aa  85.9  5e-16  Serratia proteamaculans 568  Bacteria  normal  normal  0.199701 
 
 
-
 
NC_008062  Bcen_5546  short-chain dehydrogenase/reductase SDR  39.08 
 
 
307 aa  86.3  5e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.958738  n/a   
 
 
-
 
NC_008544  Bcen2424_5911  short-chain dehydrogenase/reductase SDR  39.08 
 
 
307 aa  86.3  5e-16  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6416  short-chain dehydrogenase/reductase SDR  38.15 
 
 
307 aa  85.9  6e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3115  short-chain dehydrogenase/reductase SDR  26.75 
 
 
234 aa  85.5  8e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.137706  n/a   
 
 
-
 
NC_014230  CA2559_11468  acetoin(diacetyl)reductase  28.03 
 
 
254 aa  85.1  9e-16  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0328388  n/a   
 
 
-
 
NC_005945  BAS3218  short chain dehydrogenase/reductase family oxidoreductase  25.62 
 
 
234 aa  84.7  0.000000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.156646  n/a   
 
 
-
 
NC_007530  GBAA_3471  short chain dehydrogenase/reductase family oxidoreductase  25.62 
 
 
234 aa  84.7  0.000000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0715  short-chain dehydrogenase/reductase SDR  34.86 
 
 
269 aa  85.1  0.000000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.965054  n/a   
 
 
-
 
BN001302  ANIA_07999  conserved hypothetical protein  28.7 
 
 
266 aa  84.3  0.000000000000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009380  Strop_1599  short-chain dehydrogenase/reductase SDR  35.41 
 
 
260 aa  84  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0763  short chain dehydrogenase  32.6 
 
 
316 aa  83.2  0.000000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.920637  normal  0.460734 
 
 
-
 
NC_008527  LACR_0065  Short-chain dehydrogenase of various substrate specificities  34.5 
 
 
274 aa  83.2  0.000000000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3423  oxidoreductase, short chain dehydrogenase/reductase family  24.79 
 
 
234 aa  82.8  0.000000000000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1139  short-chain alcohol dehydrogenase-like protein  31.82 
 
 
266 aa  82.8  0.000000000000005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2448  short chain dehydrogenase  39.01 
 
 
277 aa  82.8  0.000000000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0425  short-chain dehydrogenase/reductase SDR  31.13 
 
 
241 aa  82.8  0.000000000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.116852  n/a   
 
 
-
 
NC_005957  BT9727_3196  short chain dehydrogenase  25.21 
 
 
234 aa  82.4  0.000000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0271807  n/a   
 
 
-
 
NC_011658  BCAH187_A3450  oxidoreductase, short chain dehydrogenase/reductase family  26.34 
 
 
234 aa  82.4  0.000000000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3437  oxidoreductase, short chain dehydrogenase/reductase family  25.21 
 
 
234 aa  82.4  0.000000000000006  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_1430  short-chain dehydrogenase/reductase SDR  34.46 
 
 
286 aa  82  0.000000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0955  short-chain alcohol dehydrogenase of unknown specificity  40.14 
 
 
245 aa  81.6  0.000000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  34.91 
 
 
281 aa  82  0.000000000000009  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4114  short-chain dehydrogenase/reductase SDR  34.93 
 
 
273 aa  81.3  0.00000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.953941  normal 
 
 
-
 
NC_010676  Bphyt_7087  short chain dehydrogenase  32.89 
 
 
284 aa  80.5  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1464  Short-chain dehydrogenase/reductase SDR  32.56 
 
 
262 aa  80.9  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  0.305305  normal  0.474897 
 
 
-
 
NC_013202  Hmuk_1523  short-chain dehydrogenase/reductase SDR  34.67 
 
 
269 aa  80.9  0.00000000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008347  Mmar10_1204  short-chain dehydrogenase/reductase SDR  30.5 
 
 
238 aa  80.9  0.00000000000002  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_2564  short-chain dehydrogenase/reductase  35.29 
 
 
302 aa  80.1  0.00000000000003  Synechococcus sp. CC9605  Bacteria  normal  0.554832  normal 
 
 
-
 
NC_010172  Mext_3791  short-chain dehydrogenase/reductase SDR  34.25 
 
 
273 aa  80.5  0.00000000000003  Methylobacterium extorquens PA1  Bacteria  normal  0.0700292  normal 
 
 
-
 
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