Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0069 |
Symbol | |
ID | 4432971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 65315 |
End bp | 66148 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639665877 |
Product | Short-chain dehydrogenase of various substrate specificities |
Protein accession | YP_808118 |
Protein GI | 116510902 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.367303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAA AAACTGTTGC AATTACTGGT GCTTCAAACG GAATGGGCTT TGAAGCTACT AAACTTTTTG CCAAACGTGG TTGGAAAGTT TATGCAGGGG CGCGTAGAGT TGACAAAATT CCCCAAGATG GTGAAAAAAT TAGAGCGATT AAACTTGACG TTACAGACTC TGACTCCAAT AAAGCCTTTG TTAAACAAAT TTTAGATGAA GCAGGCCATA TTGATGTGCT CATCAATAAT GCTGGTTATG GAGAATATGG GCCAGCCGAA GAAATCCCAA TGGATAAGAT TCGTAAGCAG TTTGAAACTA ACTTTTTTGG AGCTGTTGAA TTAACTCAAC TCATCTTACC AACGATGAGA GCCCAAAATT ATGGACGCAT TGTTAATATT TCATCTATTG GTGGCGATGT CTATATGCCA CTTGGTGCCT ACTATCATGC TACAAAAGCA GCCCTTCAAC AATGGTCAGA TGTTTTGGAC CTCGAAGTTG CTCAATTTGG TATTCGTTCC GTTTGTGTAC AACCGGGAGG AACTCAATCA AGCTGGGGAA ATATCGCACT AGAAAATTCC AAAAAGAACA TGAGTGAAAA TTCGGCTTAT CAACCTCTTG TGAATTCCGT TGCTTCTGGA CTTGACCGTT TTATGAAAAA TAGTGCCAAG GCTTCTGACT TAGCCGAAGT TTTTTATAAA GCAGCAACGG AGCTCAAACC GAGTCTTCGA TATCTTCACG CCTTTGGTGA TAAATTCATG GTGAATGTGG CTCGTAGACA TCCCAAAATT TTCCGAAAAG CCCTACTTAT AACTATGCGC TATTTTGAAA AACATAATCA TTAA
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Protein sequence | MTQKTVAITG ASNGMGFEAT KLFAKRGWKV YAGARRVDKI PQDGEKIRAI KLDVTDSDSN KAFVKQILDE AGHIDVLINN AGYGEYGPAE EIPMDKIRKQ FETNFFGAVE LTQLILPTMR AQNYGRIVNI SSIGGDVYMP LGAYYHATKA ALQQWSDVLD LEVAQFGIRS VCVQPGGTQS SWGNIALENS KKNMSENSAY QPLVNSVASG LDRFMKNSAK ASDLAEVFYK AATELKPSLR YLHAFGDKFM VNVARRHPKI FRKALLITMR YFEKHNH
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