| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1322 |
|---|
| Symbol | |
|---|
| ID | 4268661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1525540 |
|---|
| End bp | 1526259 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638126075 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_742161 |
|---|
| Protein GI | 114320478 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.475837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTG AAAAGATCGC TCTGGTCACC GGGGGCAGCC GCGGCATCGG GGTCGAGGTG
GCCCGCCAGC TCGCCCGCAA GGATTACCGG GTGGTCATTA CCAGCCGGGA TGGGCTGGCC
GGCAAGGCCG CTGCCGACAA GCTGCGCAGC GAGAACCTCG AGGTCTTCCA CCAGCCGCTG
GAGTTGACCC GCCAGGAGAG CGTGCGGAGG CTGGCCGGGT ACCTTCAGGA GCAGTTCGGC
CGCCTGGATG CACTGGTCAA CAACGCCGGC CAGTTCATCG ATCCGGATCC GGACGATCCC
CGGCAGGCCA GCGTGCTTGA GGCGCCCCTG AGCCAGCTGC AGGCGAGCCT CGACGTCAAC
CTGCTGGGCA CCGTCCGCGT CTGCCAGGCC GTGGTCCCGC TGATGCGCGG CCACGCCGGT
TGCATCGTCA ACGTGAGTTC CGGCTACGGC CAGCTCCAGG GCATGAAGGC CGCCTTCCCG
GGCTACCGCA TCTCCAAGAC CGCCCTGAAT GCCCTCACCC GCCTGCTGGC GGCGGAGCTG
GAGGCCGACG GCATCCGCGT CAACAGCGTC GACCCGGGGT GGACCCGTAC CCGCATGGGC
GGCAGCCAGG CCCCGCGCAG CCCCGCTGAG GCCGCCAACG GCATCGTCTG GGCGGCGACC
CTGCCGGCGG ACGGGCCGAG TGGCGGGTTT TTCCGCGACG GCACCGCGAT TCCCTGGTAG
|
|---|
| Protein sequence | MAAEKIALVT GGSRGIGVEV ARQLARKDYR VVITSRDGLA GKAAADKLRS ENLEVFHQPL
ELTRQESVRR LAGYLQEQFG RLDALVNNAG QFIDPDPDDP RQASVLEAPL SQLQASLDVN
LLGTVRVCQA VVPLMRGHAG CIVNVSSGYG QLQGMKAAFP GYRISKTALN ALTRLLAAEL
EADGIRVNSV DPGWTRTRMG GSQAPRSPAE AANGIVWAAT LPADGPSGGF FRDGTAIPW
|
|---|
| |