| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1054 |
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| Symbol | |
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| ID | 5425059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1207568 |
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| End bp | 1208296 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640880301 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001415962 |
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| Protein GI | 154245004 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.582501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA ATGAGATTAT TGCCTTGGTC AGCGGTGCCA ATCGCGGCAT CGGCTTGGCC
ATTGCGGCTG GGCTCGCGCG CCGCAAAGGT GTCAACGTGC TGCTTGGGTG CCGCGATCTT
GACCGAGGAA AGACGGCGAG CCTCCCGCTG CTCGCGGAAG GGCTCCGGGT CCGGCCGGTC
CAACTGGACG CAACGGACGA AGCCAGCGTA TCGTCGCTTG CTCATTTTAT AGAGAATGAA
TACGGGCGCC TTGACGCGCT CGTCAACAAT GCCGGAATTG GTTTAGACTA CGATCCATCA
CTGTCGGTTG TTGAGCGAAT TCAGAAAACA CTAGATGTCA ACGTCGTCGG CGCCCTGCGC
CTTACAGAGG CGATGGTCCC ATTGCTGGCG AAATCCACCC GCCCTCGGAT CGTCAACGTA
TCCTCTGAAC TCAGTTCGTT TGGGCTGCGC GCAGATCCGG ACTGGGCCTA TCGCGACTTC
AGGCTTCCCA CCTATGCGGC ATCCAAAGCG GCGCTCAATT CGCTCACGCT CAGCTATGCG
CAGCAGTTGA AGGATAAGGG CTTTAAGGTC AACGCCATTT GCCCAGGCTA CACGGCCACC
GAGGCGACCA ACTTTGCGGG GACACGCACG CCCGAACAGG CGGCGGTGAT TGCTGTTAAA
TTCGCATTGC TCGACAATGA GGGACCGAAC GGCATTTTCG TCAATGAAGT GCAGGAACTG
CCTTGGTAA
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| Protein sequence | METNEIIALV SGANRGIGLA IAAGLARRKG VNVLLGCRDL DRGKTASLPL LAEGLRVRPV
QLDATDEASV SSLAHFIENE YGRLDALVNN AGIGLDYDPS LSVVERIQKT LDVNVVGALR
LTEAMVPLLA KSTRPRIVNV SSELSSFGLR ADPDWAYRDF RLPTYAASKA ALNSLTLSYA
QQLKDKGFKV NAICPGYTAT EATNFAGTRT PEQAAVIAVK FALLDNEGPN GIFVNEVQEL
PW
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