| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0146 |
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| Symbol | |
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| ID | 3903077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 174885 |
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| End bp | 175619 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637877480 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_479269 |
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| Protein GI | 86738869 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAG CACTTGTCAC CGGGAGCAAC CGTGGATTGG GCTTCGCAAC CGCGCAGGCG
TTGGCGCGGC TCGGGCACCG GGTCCTCGTG ACCGCGCGGG AGCAGGCCGC GGCGGACAAG
GCCGCGGCCG ATCTGACGGC GCAGGGATTC GACGCCGACG CCATCGCGCT CGACGTCACC
TCCCCCGACA GCATCGCGGC AGCCACCAGG CGGGTCGCGG AGCTGCCGGC CGGCCTGGAC
ATTCTGGTCA ACAACGCGGG GATCCTGCCC GAGGCCACGG ACGGCGAGCA GCACGAGTTC
GCCTCCCTCG ATCTGTTCGG GAAGACGTAC GCGACCAACG TCTTCGGCCC GGTTGCCGTC
ACCGAGGCGC TCCTTCCGCT GCTGCGCAGG AGCCCGGCCG GCCGCATCGT CAACGTCTCC
ACCACGATGG GCTCGCTCAG CGACCAGGCG AACCCCGCAT CGCCCTACTA CGGCCTGATC
GTGCCGGCGT ACCAGAGCTC GAAGGCGGCG CTGAACAGCA TCACGATCTC GCTCGCCAAG
AAGCTCGCCG ACACCCCCAT CAAGATCAGC TCAGTCTGCC CGGGCTTCGT GCAGACCGAC
CTGACCCCGA TCAACAGAGA GCAGGCTCAA CTCACCGCCG ACCAAGCCGC GCAGGTCGTC
GTCCGGGCCG CGACCCTGCC CGACGACGCC CCCTCGGGCA CGTTCTTCGA CCAGAACGGC
ATCGTAGCCT GGTAG
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| Protein sequence | MSAALVTGSN RGLGFATAQA LARLGHRVLV TAREQAAADK AAADLTAQGF DADAIALDVT
SPDSIAAATR RVAELPAGLD ILVNNAGILP EATDGEQHEF ASLDLFGKTY ATNVFGPVAV
TEALLPLLRR SPAGRIVNVS TTMGSLSDQA NPASPYYGLI VPAYQSSKAA LNSITISLAK
KLADTPIKIS SVCPGFVQTD LTPINREQAQ LTADQAAQVV VRAATLPDDA PSGTFFDQNG
IVAW
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