Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0065 |
Symbol | |
ID | 4432967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 61277 |
End bp | 62101 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639665873 |
Product | Short-chain dehydrogenase of various substrate specificities |
Protein accession | YP_808114 |
Protein GI | 116510898 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAG TTATCATCAC AGGAGCCTCT AATGGAATGG GCTATAAAGC AGCCAAAGTC TTTGCAAGTA AAGGTTGGAA AGTATTCGCT GGTGCTCGAC GTGTCGAAAA GATTCCGACC GATCAAAATA TTGTCGGGCT AAAACTTGAT GTCACAGATT CTGCTTCTAA TCATGCTTTT ATCGCTGAAA TCCTGAAACA AACACAGCAA ATCGACGTAC TTATCAATAA TGCTGGCTAT GGTGAGTTTG GTCCAGCCGA AGAAATTCCA ATGGAAAATG TCCGTAAGCA ATTTGAAACG AATTTCTTTG GCGCTGTGGA GCTAACTCAG CTTGTTCTGC CTACGATGCG TGCTCAAAAA TCTGGGCGAA TTATTAATAT TTCATCTATT GGTGGCGATT TGTATATGCC TTTGGGAAGT TATTATCATG CAACAAAAGC TGCTCTTCAA CAATGGAGCG ATGCACTGGA TGTTGAAATC AAGGACTTTG GTGCACAATC AATCATTATA CAACCTGGCG GAACTGCGTC CAGCTGGGGC GAGATTGCCA TAGGAAATGC GCTTAAAAAC TTGAAAAAAG ATAGTTTTTA TCAACCATTA GTTGAAAAGA TACAAGGCGC ACTTTCTGGT AATGCTTCCG TGGGGGCGAC TTCTCTTGAC CTTGCTGAAC TTTTTTATAA AGCGGCAACT GACCAAAATC CAAAACGTCG TTATTTCAAC TCATTTGGTG ATCGACCAGT CGTTCATATT GCGCGAGCTC ATCCAAGATT ATTCAGTCGA CTGGCTACTT TTATGCTTAA TCGTGTCGCT AAAAAGAAAG CCTAA
|
Protein sequence | MKTVIITGAS NGMGYKAAKV FASKGWKVFA GARRVEKIPT DQNIVGLKLD VTDSASNHAF IAEILKQTQQ IDVLINNAGY GEFGPAEEIP MENVRKQFET NFFGAVELTQ LVLPTMRAQK SGRIINISSI GGDLYMPLGS YYHATKAALQ QWSDALDVEI KDFGAQSIII QPGGTASSWG EIAIGNALKN LKKDSFYQPL VEKIQGALSG NASVGATSLD LAELFYKAAT DQNPKRRYFN SFGDRPVVHI ARAHPRLFSR LATFMLNRVA KKKA
|
| |