More than 300 homologs were found in PanDaTox collection
for query gene Hoch_4302 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_4302  short-chain dehydrogenase/reductase SDR  100 
 
 
265 aa  527  1e-149  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.729821 
 
 
-
 
NC_011884  Cyan7425_0352  short-chain dehydrogenase/reductase SDR  42.96 
 
 
239 aa  200  1.9999999999999998e-50  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.512494 
 
 
-
 
NC_014248  Aazo_3598  short-chain dehydrogenase/reductase SDR  42.22 
 
 
238 aa  197  2.0000000000000003e-49  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0980  Short-chain dehydrogenase/reductase SDR  42.01 
 
 
238 aa  195  6e-49  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000000633587  normal 
 
 
-
 
NC_011729  PCC7424_1765  short-chain dehydrogenase/reductase SDR  40.67 
 
 
237 aa  185  8e-46  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_4758  short-chain dehydrogenase/reductase SDR  44.36 
 
 
227 aa  177  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0513  short-chain dehydrogenase/reductase SDR  42.12 
 
 
233 aa  173  2.9999999999999996e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1322  short-chain dehydrogenase/reductase SDR  40.22 
 
 
239 aa  172  5e-42  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.475837  normal 
 
 
-
 
NC_013947  Snas_5559  short-chain dehydrogenase/reductase SDR  45.15 
 
 
240 aa  166  2.9999999999999998e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0498  short-chain dehydrogenase/reductase SDR  39.13 
 
 
250 aa  159  4e-38  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0163958 
 
 
-
 
NC_013440  Hoch_6522  short-chain dehydrogenase/reductase SDR  37.97 
 
 
229 aa  157  2e-37  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0814  putative short-chain dehydrogenase/reductase  38.46 
 
 
257 aa  156  3e-37  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.968056 
 
 
-
 
NC_011672  PHATRDRAFT_44630  predicted protein  35.74 
 
 
277 aa  152  4e-36  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0847345  n/a   
 
 
-
 
NC_013730  Slin_0199  short-chain dehydrogenase/reductase SDR  34.31 
 
 
237 aa  149  6e-35  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.735027 
 
 
-
 
NC_007802  Jann_1322  short-chain dehydrogenase/reductase SDR  39.71 
 
 
229 aa  146  4.0000000000000006e-34  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2451  short-chain dehydrogenase/reductase SDR  36.57 
 
 
241 aa  141  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.409582  normal 
 
 
-
 
NC_007413  Ava_2801  Short-chain dehydrogenase/reductase SDR  34.46 
 
 
248 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0146  short-chain dehydrogenase/reductase SDR  35.56 
 
 
244 aa  140  3e-32  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1569  short-chain dehydrogenase/reductase SDR  33.94 
 
 
245 aa  134  1.9999999999999998e-30  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0516  short-chain dehydrogenase/reductase SDR  37.64 
 
 
244 aa  132  6.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0535711  normal 
 
 
-
 
NC_013131  Caci_5902  short-chain dehydrogenase/reductase SDR  34.21 
 
 
241 aa  131  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5128  short-chain dehydrogenase/reductase SDR  36.43 
 
 
270 aa  131  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5413  short-chain dehydrogenase/reductase SDR  33.95 
 
 
245 aa  131  1.0000000000000001e-29  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.0000000035289  normal 
 
 
-
 
NC_011145  AnaeK_2663  short-chain dehydrogenase/reductase SDR  38.11 
 
 
236 aa  128  1.0000000000000001e-28  Anaeromyxobacter sp. K  Bacteria  normal  0.0497428  n/a   
 
 
-
 
NC_011891  A2cp1_2758  short-chain dehydrogenase/reductase SDR  38.11 
 
 
236 aa  127  2.0000000000000002e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7619  short chain oxidoreductase  38.15 
 
 
244 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.493234  normal  0.169233 
 
 
-
 
NC_007760  Adeh_1207  short-chain dehydrogenase/reductase SDR  38.11 
 
 
236 aa  123  3e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.827556  n/a   
 
 
-
 
NC_007951  Bxe_A2677  putative short-chain dehydrogenase/oxidoreductase  34.07 
 
 
245 aa  122  7e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.334903  normal 
 
 
-
 
NC_012850  Rleg_0664  short-chain dehydrogenase/reductase SDR  34.08 
 
 
244 aa  121  9e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.120829  normal  0.282186 
 
 
-
 
NC_013440  Hoch_6753  short-chain dehydrogenase/reductase SDR  37.83 
 
 
280 aa  121  9.999999999999999e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5380  short-chain dehydrogenase/reductase SDR  33.21 
 
 
246 aa  120  1.9999999999999998e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2770  short-chain dehydrogenase/reductase SDR  31.48 
 
 
260 aa  116  3.9999999999999997e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1762  short-chain dehydrogenase/reductase SDR  34.47 
 
 
251 aa  114  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.350436  normal  0.454063 
 
 
-
 
NC_013093  Amir_0855  short-chain dehydrogenase/reductase SDR  33.46 
 
 
247 aa  115  1.0000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.5116  n/a   
 
 
-
 
NC_013131  Caci_0413  short-chain dehydrogenase/reductase SDR  36.43 
 
 
243 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6333  short-chain dehydrogenase/reductase SDR  32.39 
 
 
252 aa  114  2.0000000000000002e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  0.519755  normal 
 
 
-
 
NC_011138  MADE_01679  20-beta-hydroxysteroid dehydrogenase  32.59 
 
 
242 aa  113  4.0000000000000004e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.774728  n/a   
 
 
-
 
NC_013169  Ksed_06450  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  32.09 
 
 
240 aa  112  6e-24  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1084  short-chain dehydrogenase/reductase SDR  28 
 
 
248 aa  112  8.000000000000001e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0498  short-chain dehydrogenase/reductase SDR  31.56 
 
 
235 aa  109  4.0000000000000004e-23  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0474  short-chain dehydrogenase/reductase SDR  28.3 
 
 
246 aa  108  7.000000000000001e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1054  short-chain dehydrogenase/reductase SDR  32.71 
 
 
242 aa  108  1e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.582501 
 
 
-
 
NC_013131  Caci_5035  short-chain dehydrogenase/reductase SDR  33.45 
 
 
249 aa  105  8e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
BN001307  ANIA_02369  short chain dehydrogenase family protein, putative (AFU_orthologue; AFUA_3G15350)  32.96 
 
 
309 aa  104  2e-21  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.406317 
 
 
-
 
NC_013132  Cpin_4618  short-chain dehydrogenase/reductase SDR  30.65 
 
 
245 aa  103  3e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.978262  normal  0.20317 
 
 
-
 
NC_009441  Fjoh_3828  short-chain dehydrogenase/reductase SDR  30.77 
 
 
246 aa  100  2e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5665  short-chain dehydrogenase/reductase SDR  30.69 
 
 
257 aa  100  3e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.135845  normal 
 
 
-
 
NC_011772  BCG9842_B3562  short chain dehydrogenase  25.09 
 
 
236 aa  99.8  4e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1469  short-chain dehydrogenase/reductase  31.25 
 
 
234 aa  99  6e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4179  short-chain dehydrogenase/reductase SDR  37.07 
 
 
233 aa  98.2  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.604748  normal 
 
 
-
 
NC_014210  Ndas_2522  short-chain dehydrogenase/reductase SDR  31.65 
 
 
250 aa  97.1  3e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.886047  decreased coverage  0.000126478 
 
 
-
 
NC_005957  BT9727_1616  short chain dehydrogenase  26.43 
 
 
236 aa  96.7  3e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.124879  n/a   
 
 
-
 
NC_011773  BCAH820_1818  short chain dehydrogenase  26.43 
 
 
236 aa  96.7  3e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A1782  short chain dehydrogenase  25.56 
 
 
236 aa  95.9  6e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1267  short-chain dehydrogenase/reductase SDR  31.23 
 
 
232 aa  95.9  7e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.139748 
 
 
-
 
NC_009783  VIBHAR_02810  hypothetical protein  31.17 
 
 
247 aa  94.7  1e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_6143  short-chain dehydrogenase/reductase SDR  28.96 
 
 
272 aa  94.4  2e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.684326  normal 
 
 
-
 
NC_010338  Caul_2869  short-chain dehydrogenase/reductase SDR  29.41 
 
 
250 aa  94.4  2e-18  Caulobacter sp. K31  Bacteria  normal  normal  0.0227742 
 
 
-
 
NC_012856  Rpic12D_1522  short-chain dehydrogenase/reductase SDR  32.91 
 
 
254 aa  92.8  5e-18  Ralstonia pickettii 12D  Bacteria  normal  0.0490038  normal  0.520511 
 
 
-
 
NC_010552  BamMC406_5255  short-chain dehydrogenase/reductase SDR  33.92 
 
 
259 aa  92.8  6e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4034  short-chain dehydrogenase/reductase SDR  33.96 
 
 
231 aa  92  9e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.376795 
 
 
-
 
NC_007484  Noc_2690  Short-chain dehydrogenase/reductase SDR  26.02 
 
 
232 aa  91.3  1e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.608582  n/a   
 
 
-
 
NC_007643  Rru_A1945  Short-chain dehydrogenase/reductase SDR  33.33 
 
 
227 aa  91.3  2e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2062  short-chain dehydrogenase/reductase SDR  32.74 
 
 
256 aa  90.1  3e-17  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.624972 
 
 
-
 
NC_007908  Rfer_0911  short-chain dehydrogenase/reductase SDR  32.77 
 
 
254 aa  89.4  6e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_37020  short-chain dehydrogenase of unknown substrate specificity  34.19 
 
 
279 aa  89  8e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4714  short chain dehydrogenase  29.03 
 
 
254 aa  88.6  1e-16  Ralstonia pickettii 12J  Bacteria  normal  0.0274692  decreased coverage  0.00406557 
 
 
-
 
NC_009380  Strop_2190  short-chain dehydrogenase/reductase SDR  33.46 
 
 
263 aa  88.2  1e-16  Salinispora tropica CNB-440  Bacteria  normal  0.230027  normal 
 
 
-
 
NC_013440  Hoch_6853  short-chain dehydrogenase/reductase SDR  30.15 
 
 
223 aa  88.2  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0933933 
 
 
-
 
NC_014151  Cfla_3113  short-chain dehydrogenase/reductase SDR  36.07 
 
 
256 aa  88.2  1e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000552143 
 
 
-
 
NC_009512  Pput_1844  short-chain dehydrogenase/reductase SDR  31 
 
 
255 aa  88.2  1e-16  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.0017919 
 
 
-
 
NC_012857  Rpic12D_3637  short chain dehydrogenase  29.03 
 
 
254 aa  88.6  1e-16  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6404  3-oxoacyl-[acyl-carrier-protein] reductase  28.45 
 
 
246 aa  87.4  2e-16  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2386  short-chain dehydrogenase/reductase SDR  27.92 
 
 
231 aa  87.4  2e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.927324 
 
 
-
 
NC_010623  Bphy_5045  short chain dehydrogenase  28.57 
 
 
254 aa  85.9  6e-16  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2798  short-chain dehydrogenase/reductase SDR  31.58 
 
 
235 aa  85.9  6e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1326  3-ketoacyl-(acyl-carrier-protein) reductase  26.86 
 
 
246 aa  85.9  6e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1276  short chain dehydrogenase  30.36 
 
 
245 aa  85.9  6e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.127244 
 
 
-
 
NC_008146  Mmcs_2625  short-chain dehydrogenase/reductase SDR  34.45 
 
 
248 aa  85.5  9e-16  Mycobacterium sp. MCS  Bacteria  normal  0.627882  n/a   
 
 
-
 
NC_009077  Mjls_2654  short-chain dehydrogenase/reductase SDR  34.45 
 
 
248 aa  85.5  9e-16  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_2669  short-chain dehydrogenase/reductase SDR  34.45 
 
 
248 aa  85.5  9e-16  Mycobacterium sp. KMS  Bacteria  normal  0.412658  normal  0.910239 
 
 
-
 
NC_012850  Rleg_0293  short-chain dehydrogenase/reductase SDR  33.18 
 
 
257 aa  85.1  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.673149  normal 
 
 
-
 
NC_009616  Tmel_0547  short-chain dehydrogenase/reductase SDR  27.1 
 
 
206 aa  85.1  0.000000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3549  short-chain dehydrogenase/reductase SDR  29.63 
 
 
261 aa  84  0.000000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.32556  normal 
 
 
-
 
NC_008820  P9303_07591  Short-chain dehydrogenase/reductase (SDR) superfamily protein  30.15 
 
 
221 aa  84.3  0.000000000000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.122507 
 
 
-
 
NC_008228  Patl_3842  short-chain dehydrogenase/reductase SDR  30.17 
 
 
260 aa  84.3  0.000000000000002  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.0083213  n/a   
 
 
-
 
NC_009091  P9301_07551  short-chain dehydrogenase/reductase  24.05 
 
 
221 aa  84  0.000000000000002  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0979  short chain dehydrogenase/reductase family oxidoreductase  29.23 
 
 
232 aa  84  0.000000000000003  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0705  short-chain dehydrogenase/reductase  25.57 
 
 
221 aa  83.6  0.000000000000003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.096337  n/a   
 
 
-
 
NC_014212  Mesil_0154  short-chain dehydrogenase/reductase SDR  33.18 
 
 
255 aa  83.6  0.000000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.649375  normal  0.270956 
 
 
-
 
NC_011883  Ddes_1614  3-oxoacyl-(acyl-carrier-protein) reductase  30.77 
 
 
253 aa  83.2  0.000000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0547221  n/a   
 
 
-
 
NC_009427  Saro_3528  short-chain dehydrogenase/reductase SDR  32.07 
 
 
228 aa  83.2  0.000000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.97281  n/a   
 
 
-
 
NC_009953  Sare_4589  short-chain dehydrogenase/reductase SDR  31.02 
 
 
237 aa  83.2  0.000000000000004  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0285855 
 
 
-
 
NC_013169  Ksed_12310  short-chain dehydrogenase of unknown substrate specificity  33.19 
 
 
270 aa  83.2  0.000000000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.3676  normal  0.223065 
 
 
-
 
NC_007348  Reut_B5719  short chain dehydrogenase  27.82 
 
 
254 aa  82.8  0.000000000000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_08791  short-chain dehydrogenase/reductase  25.57 
 
 
221 aa  82.8  0.000000000000005  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2567  gluconate 5-dehydrogenase  30.8 
 
 
267 aa  82.8  0.000000000000005  Polaromonas sp. JS666  Bacteria  normal  0.0700463  normal  0.82906 
 
 
-
 
NC_009441  Fjoh_3892  short-chain dehydrogenase/reductase SDR  28.27 
 
 
331 aa  82.4  0.000000000000006  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  28.89 
 
 
269 aa  82.4  0.000000000000006  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  30.97 
 
 
260 aa  82.4  0.000000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
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