Gene Smal_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1569 
Symbol 
ID6475438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1766673 
End bp1767410 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID642730751 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002027957 
Protein GI194365347 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC ATCAGAACAA GATCGCGCTG GTTACCGGCG CTACCCGCGG CATCGGCGCC 
GAGACCGTGC GCCAGCTGGC CCAGGCCGGC GTGCACACGC TGCTGGCCGG CCGCAAGCGC
GAGACCGCTG TCGAGCAGGC ACTGAAGCTG CAGGCCGAGG GCCTGCCGGT GGAAGCCATC
CAGCTGGACG TGACCGACGC GGCCAGCATC GCCGAAGCGG TCGAGCAGGT ACGCCAGCGC
CACGGGCGCC TGGACATCCT GGTCAACAAC GCCGGCATCA TGATCGAGAA CCCGGCACAG
GCGCCGTCCG AACAGTCGCT GGATACCTGG AAGCGCACCT TCGACACCAA CGTGTACGCA
CTGGTCGCGG TGACCCAGGC CTTCCTGCCG CTGGTCAGGC AGGCCAAGTC CGGGCGCATC
GTCAACGTAT CGAGCATGCT CGGCTCGCAG ACCCTGCACG CTGATCCGAC CTCGGGCATC
TACGATTTCA AGATCCCCGC GTACAACGCC TCCAAGGCAG CGGTAAACAG CTGGACGCTG
GCGCTGGCCC ATGAACTGCG CAGCACCCAG ATCAAGGTCA ATACCGTGCA TCCGGGTTAC
GTGAAAACCG ATATGAACGG CGGCCACGGC GAGATCGAGA TCAGCGAAGG CGCGCGCTCC
AGCGTGCAGA TGGCACTGAT CGGCCATGAA GGTCCGAACG GCAGCTTCAC TTACCTGGGT
GAGGTGCTGC CATGGTGA
 
Protein sequence
MNSHQNKIAL VTGATRGIGA ETVRQLAQAG VHTLLAGRKR ETAVEQALKL QAEGLPVEAI 
QLDVTDAASI AEAVEQVRQR HGRLDILVNN AGIMIENPAQ APSEQSLDTW KRTFDTNVYA
LVAVTQAFLP LVRQAKSGRI VNVSSMLGSQ TLHADPTSGI YDFKIPAYNA SKAAVNSWTL
ALAHELRSTQ IKVNTVHPGY VKTDMNGGHG EIEISEGARS SVQMALIGHE GPNGSFTYLG
EVLPW