| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5380 |
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| Symbol | |
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| ID | 8361557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6881135 |
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| End bp | 6881875 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967527 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125011 |
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| Protein GI | 256424358 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG TACTGATAAC AGGAGCAAAT AAAAGCATCG GCTTCGAAAC AGCAAGACAA
TTATTACAAC AGGGATATTA CGTTTACCTG GGCTGCCGTG ATCTGCAAAA AGGCAGGCAG
GCAGTCAGCC AGTTACAATC AGAAGGCTTC AGCCAGGTGG AAGCACTGGT GATCGATGTG
GACAACGTTG ATTCAATACA GGCAGCCCGT CACACACTCG GCCAACAAAT CAAAGTATTG
GACGTATTGG TCAATAATGC CGGCGTACTC GGTAGTATGA CAGCACAAAC TGCACTGGAA
ACGGATATCA GCATCTTCAG ACAAGTATTC GAAACAAACT ACTTCGGTGT CATCTCCGTA
ACACAGGCAT TCATTGATCT GTTGCAGGTT TCTCCGGCCC CCAGGATCGT CAATGTGACT
TCCGGTCTGG GCTCGCTCAC CCTGCAAAAT GATCCTGCCT GGAAACACTA TCTTGTCAAA
CCATCCGCCT ATGTCTCCTC TAAAGCGGCA CTCAATGCCT ATACCATCGT ACTGGCGTAT
AATCTGCGTG ACACCGCGTT TAAAGTGAAT GCAGTGGATC CTGGTTATAC CGCTACGGAC
TTCAATCATC ACAGCGGTCC GGGTACCGTA CAGGACGCGG CCGCCCGTGT AGTAAAAGCA
GCGACTTTGG GTGAAAACGG CCCTTCCGGT ATATTCTACA GTGATGATAA TAATCCGGAG
ACCGGCATCA GTGCCTGGTA A
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| Protein sequence | MKTVLITGAN KSIGFETARQ LLQQGYYVYL GCRDLQKGRQ AVSQLQSEGF SQVEALVIDV
DNVDSIQAAR HTLGQQIKVL DVLVNNAGVL GSMTAQTALE TDISIFRQVF ETNYFGVISV
TQAFIDLLQV SPAPRIVNVT SGLGSLTLQN DPAWKHYLVK PSAYVSSKAA LNAYTIVLAY
NLRDTAFKVN AVDPGYTATD FNHHSGPGTV QDAAARVVKA ATLGENGPSG IFYSDDNNPE
TGISAW
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