| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1322 |
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| Symbol | |
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| ID | 3933769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1286131 |
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| End bp | 1286820 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903672 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509264 |
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| Protein GI | 89053813 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC CCCGTATCGC CCTGATCACC GGCGCAAACC GTGGCATTGG CCGCGAGGTT
GCCCGGCAAT TGGCCCAAGA TCACGGCCTG CACGTTCTGC TCGGCTCCCG TGACCTCATC
AAAGGAGAAG AAGCTGCACG TGAACGACCC AACGCCCGTG CCATCCAATT GGACGTGGCC
GACCCGAAAT CGGTGGCCCG CGCATTTGAG CAGATCAGCC AGGAGGTCGG GCGGCTTGAT
GTGCTGGTGA ACAATGCCGG CATCGACTAT GACACCGACC AACGCGCCAG CATCGCTGAC
CTGACCCGCG TCCGGCGCGC GTTTGACACG AACCTGTTCG GCGCGTGGGA TGTGGCGATT
GCCGCTACAC CGCTACTGAA AAAGGGCCTG TCTCCTCGCC TTGTCAACGT CTCCTCCGGT
GCGGGGGCGC TGACCGGCAT GGGCGGGGGA ACAGCGAGCT ACGGTATCTC AAAGGCTGCG
CTCAACGCCC TGACGATCAA GCTGGCAGCG GAGTTGCGAA GCGACCGCGT CCTCGTGAAC
GCCGTCTGTC CGGGTTGGGT CGCAACAGAC ATGGGTGGTG GGGGTCGACC GATCCCCGAG
GGTGCAAAAG GCGTCGTCTG GGCCGCAACA TTGCCCGACA CGGGACCAAC AGGCGGCTTC
TTCCGCGATG GGAACCGGAT CGATTGGTGA
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| Protein sequence | MPRPRIALIT GANRGIGREV ARQLAQDHGL HVLLGSRDLI KGEEAARERP NARAIQLDVA
DPKSVARAFE QISQEVGRLD VLVNNAGIDY DTDQRASIAD LTRVRRAFDT NLFGAWDVAI
AATPLLKKGL SPRLVNVSSG AGALTGMGGG TASYGISKAA LNALTIKLAA ELRSDRVLVN
AVCPGWVATD MGGGGRPIPE GAKGVVWAAT LPDTGPTGGF FRDGNRIDW
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