| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4618 |
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| Symbol | |
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| ID | 8360791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5764936 |
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| End bp | 5765673 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966772 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124260 |
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| Protein GI | 256423607 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.978262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.20317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAG CATTAGTTAC AGGCGCCAAC AAAGGGATTG GCTTTGAAGT GGCCAAGATA
CTCGCACAGA AAGGTTTTTT CGTTTATTTA GGTAGCCGCA CAATTGAAAA TGGATTGTCC
GCAGTAGAAA AACTACGCGC TAAAGGACTA AATAATATAG CCGCCGTACA ACTGGATGTT
AGCAGTCAGA CCTCTGTCGA TGCTGCACGC AGGGAGATCG GTGAGAAAAC CGATGTACTG
GATGTGCTGG TCAATAATGC AGGTATTGCC GGTGGATTTG AGCAATCGGC ACTTACCTCC
TCAGCGGATC AATATCTGTC CGTATTTGAT ACAAATTTAT TCGGCGTTGT AAGAACGACG
CAGGCATTTA TTGATCTGCT TAGAAAGTCA TCCGAACCAA GGATCGTAAA CGTAAGCACC
GCTATGGCAT CCCTGTCAAT GGCCGCAGAT ATTCAAAATA GTAATTACCC GAAACGGTAT
GTCATTTACC AGTCTTCTAA AGCTGCACTG AATATGTACA CGGTACAACT GGCGTATGAA
TTGCGCGATA CCGCATTTAA GGTGAATGCA GTTTGCCCGG GATGGACACA AACTGATTTT
ACCATGCAAC AAGGCACCAA CACACCGGAA CAAGCAGGTG AACGTATTGC TAAATATGCA
CTGATCGGCG CAGATGGACC AACCGCGCAA TATATCAGTG AAGAATACTT CCCTGAACCA
GCGACTTGTC CCTGGTAA
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| Protein sequence | MKSALVTGAN KGIGFEVAKI LAQKGFFVYL GSRTIENGLS AVEKLRAKGL NNIAAVQLDV
SSQTSVDAAR REIGEKTDVL DVLVNNAGIA GGFEQSALTS SADQYLSVFD TNLFGVVRTT
QAFIDLLRKS SEPRIVNVST AMASLSMAAD IQNSNYPKRY VIYQSSKAAL NMYTVQLAYE
LRDTAFKVNA VCPGWTQTDF TMQQGTNTPE QAGERIAKYA LIGADGPTAQ YISEEYFPEP
ATCPW
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