Gene Caci_5902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5902 
Symbol 
ID8337264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6809977 
End bp6810702 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content70% 
IMG OID644959006 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003116601 
Protein GI256395037 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CGACGATCGC GCTGGTCACC GGCGCGAACA AGGGTATCGG GTACGAGATC 
GCGGCCGGGC TCGGCGCGGT GGGGTTCAGC GTCGGCGTGG GCGCTCGGGA CGAGGGGCGC
CGGGATGCGG CCGTGGCGAA ACTGCGCGCG GCGGGCGTGG ACGCGTTCGG CGTGCCGCTG
GACGTGACCG ACGACGCGAG CGTGGCCGCC GCGGCGCGGC TGATCGAGGA GCGCGCGGGG
CGTCTGGACG TGCTGATCAA CAACGCCGGT ATCGCCGAGG GCTGGCCGGA CAACCCGACT
TCTTTGGATC CGGAGGTCGT GCGGCGGATG GTGGACACCA ACGTCATCGG CGTCATCCGG
GTCACCAACG CGATGCTGCC GCTGCTGCGC CGCTCGGCGC ACCCGCGGAT CGTCAACCAG
TCCAGCGGGG TCTCCTCGCT GACGTACCAG ACCACGCCCG GCAGCGAGCG CGGCGGGATC
AGCGGCGGCT ACACGCCGAC GAAGACGTAT CTGAACGCTG TCACCATCCA GTACGCCAAG
GAACTCAAGG ACACCGGCAT CCTGATCAAC CTCGCCTGTC CCGGCTACGT GGCCACGGAT
TTGAACGGCT TCCAGGGCAC CCGCACCCCC GAGCAGGGCG CGGCGGCCTC GATCCGGCTC
GCGACGCTGC CGGACGACGG GCCGAGCGGC GGACTGTTCG ACGATGAGGG GGTCATCCCT
TGGTAG
 
Protein sequence
MSETTIALVT GANKGIGYEI AAGLGAVGFS VGVGARDEGR RDAAVAKLRA AGVDAFGVPL 
DVTDDASVAA AARLIEERAG RLDVLINNAG IAEGWPDNPT SLDPEVVRRM VDTNVIGVIR
VTNAMLPLLR RSAHPRIVNQ SSGVSSLTYQ TTPGSERGGI SGGYTPTKTY LNAVTIQYAK
ELKDTGILIN LACPGYVATD LNGFQGTRTP EQGAAASIRL ATLPDDGPSG GLFDDEGVIP
W