Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5902 |
Symbol | |
ID | 8337264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6809977 |
End bp | 6810702 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959006 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003116601 |
Protein GI | 256395037 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CGACGATCGC GCTGGTCACC GGCGCGAACA AGGGTATCGG GTACGAGATC GCGGCCGGGC TCGGCGCGGT GGGGTTCAGC GTCGGCGTGG GCGCTCGGGA CGAGGGGCGC CGGGATGCGG CCGTGGCGAA ACTGCGCGCG GCGGGCGTGG ACGCGTTCGG CGTGCCGCTG GACGTGACCG ACGACGCGAG CGTGGCCGCC GCGGCGCGGC TGATCGAGGA GCGCGCGGGG CGTCTGGACG TGCTGATCAA CAACGCCGGT ATCGCCGAGG GCTGGCCGGA CAACCCGACT TCTTTGGATC CGGAGGTCGT GCGGCGGATG GTGGACACCA ACGTCATCGG CGTCATCCGG GTCACCAACG CGATGCTGCC GCTGCTGCGC CGCTCGGCGC ACCCGCGGAT CGTCAACCAG TCCAGCGGGG TCTCCTCGCT GACGTACCAG ACCACGCCCG GCAGCGAGCG CGGCGGGATC AGCGGCGGCT ACACGCCGAC GAAGACGTAT CTGAACGCTG TCACCATCCA GTACGCCAAG GAACTCAAGG ACACCGGCAT CCTGATCAAC CTCGCCTGTC CCGGCTACGT GGCCACGGAT TTGAACGGCT TCCAGGGCAC CCGCACCCCC GAGCAGGGCG CGGCGGCCTC GATCCGGCTC GCGACGCTGC CGGACGACGG GCCGAGCGGC GGACTGTTCG ACGATGAGGG GGTCATCCCT TGGTAG
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Protein sequence | MSETTIALVT GANKGIGYEI AAGLGAVGFS VGVGARDEGR RDAAVAKLRA AGVDAFGVPL DVTDDASVAA AARLIEERAG RLDVLINNAG IAEGWPDNPT SLDPEVVRRM VDTNVIGVIR VTNAMLPLLR RSAHPRIVNQ SSGVSSLTYQ TTPGSERGGI SGGYTPTKTY LNAVTIQYAK ELKDTGILIN LACPGYVATD LNGFQGTRTP EQGAAASIRL ATLPDDGPSG GLFDDEGVIP W
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