| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0855 |
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| Symbol | |
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| ID | 8325018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 942082 |
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| End bp | 942825 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644941397 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003098662 |
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| Protein GI | 256375002 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.5116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGA AGCCAGTCGC GCTGGTCACC GGCGCCAACA AGGGGATCGG CTACGAGATC
GCGGCGGGGC TGGGCGCCCT CGGGTGGGCC GTCGGGGTCG GGGCGCGGGA CGACGCCCGG
CGGGAGGAGG CCGTCGCCAA GCTCCGGGCC GCCGGGGTGG ACGCGTTCGG GGTGCCGCTG
GACGTCACCG CCGACGACAC GGCCGCGGAC TCCGCGACGG CCGCCGCCGC GCTGGTCGAG
CGGGAGCGCG GGCGGCTCGA CTCGCTGGTC AACAACGCGG GCATCACCGG CGGGATGCCG
CAGGAGCCCA CGCTGATCGA CCCGGACACC ATCCGGACCG TCGTGGAGAC CAACGTCATC
GGCGTCCTGC GGGTCACCAA CGCGTTCCTG CCGCTGCTGC GCCGCTCCGC CTCGCCGCGG
ATCGTCAACG TCTCCAGCTC CGTCGGGTCG CTGACCTACC AGTCGAGCAC GCAGGCCGAC
ACCAAGGTCG GGCCGATCGC CGCCGCCTAC TCCCCGTCCA AGTCGTTCCT CAACGCGATC
ACCCTCCAGT ACGCCAGGGA GCTGGCGGGC ACGAACGTGC TGATCAACTC CTGCTGCCCC
GGCTACGTCG CCACCGACCT CAACGGGTTC CGGGGCCACC GCACGCCCGA GCAGGGCGCC
GCCGCCGCGA TCCGGCTCGC CACGCTGGCC GACGGCGGGC CCACCGGGAA GTTCTTCGAC
GACGAGGGCG AGGTGCCCTG GTGA
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| Protein sequence | MSEKPVALVT GANKGIGYEI AAGLGALGWA VGVGARDDAR REEAVAKLRA AGVDAFGVPL
DVTADDTAAD SATAAAALVE RERGRLDSLV NNAGITGGMP QEPTLIDPDT IRTVVETNVI
GVLRVTNAFL PLLRRSASPR IVNVSSSVGS LTYQSSTQAD TKVGPIAAAY SPSKSFLNAI
TLQYARELAG TNVLINSCCP GYVATDLNGF RGHRTPEQGA AAAIRLATLA DGGPTGKFFD
DEGEVPW
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