| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2869 |
|---|
| Symbol | |
|---|
| ID | 5900324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3116676 |
|---|
| End bp | 3117428 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641563366 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001684494 |
|---|
| Protein GI | 167646831 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0227742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGC GCATCGCCCT CGTCACCGGC GCCAATCAAG GCGTGGGTCT GCAGGTCGCC
ACGGAACTGG TTGCGAACGG CGTCACGGTC TTGGTCGGGT CGCGCGACAT CACGCGAGGC
GAAGACGCGG CCAAGCAGAT CGGGGCGGGG GCCACCGCAC TCCAACTGGA CGTGACGGAT
CACGCCTCGA TCGCCGAAGC GGCGGAGCGC ATTCGCCGCG AGTTCGGGCG CCTGGACCTG
CTCGTGAACA ACGCCGCCAT TTCGAACACG CGAAAGGGCG ACCTGTCCTC CGAGGCGTAC
GGAAAGCTGA CTCGCGCCAG CAACGTGTCG CTCGAGGAGA TGCGCGCGGT GTGGGACACC
AACGTGTTCG GCGTCCTGGC CGTCTACCAG GCGATGCTGC CGCTCCTGCG CGAGTCGTCG
GACGCCCGGA TCGTCAATGT GTCGAGCGGC CTCGGTTCGT TGACGGCCAA CGCTGACCCC
GCCTTTCCCT ATCGCTCGAT GTTTGGCCCG GTGTACCCGG CGTCGAAGGC GGCTCTGAAC
GCGGTGACGC TCGCGATGAT GGTCGAGTTG GAGTCCACAG GGATCAAGGT CAACCTCGTC
TCGCCGGCCT TCACCAAGAC AAACCTGAAT GGGTATACGG GCGTGGAGTC CGTCGAGGAC
GGCTCTCGCG AAGTGGTGCG CGTCGCGCTG CTGGGTCCGG ACGGCCCGAC GGGTACGTTC
ACGGGCTGGG AGAACACGAC GATTCCGTGG TGA
|
|---|
| Protein sequence | MPKRIALVTG ANQGVGLQVA TELVANGVTV LVGSRDITRG EDAAKQIGAG ATALQLDVTD
HASIAEAAER IRREFGRLDL LVNNAAISNT RKGDLSSEAY GKLTRASNVS LEEMRAVWDT
NVFGVLAVYQ AMLPLLRESS DARIVNVSSG LGSLTANADP AFPYRSMFGP VYPASKAALN
AVTLAMMVEL ESTGIKVNLV SPAFTKTNLN GYTGVESVED GSREVVRVAL LGPDGPTGTF
TGWENTTIPW
|
|---|
| |