Gene Bcen2424_5911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5911 
Symbol 
ID4454623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp43218 
End bp44141 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID639697972 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_839537 
Protein GI116686290 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGC GGTCCTCTAA CCTCATTGGC TGGGAAACAC TCAACATGTC CAGAACCATT 
CTGATCACCG GCGCCAGCAG CGGCTTCGGC CGCGACACCG CGGAAACACT CTCACGTGCC
GGGCACCGGG TATTCGCGTC GATGCGTGAC GTCGCCGGCC GCAACCGGCC GCATGCCGAT
GCGCTGCGGG CGAGCGGCGT GCAGGTCGTC GAACTCGATG TGACGGACGA TGCGTCCGTC
GAGCGCGGCG TCGCCTCCGT GCTGGAACAT GCCGGGCGTC TCGATGTCCT GATCAATAAC
GCTGGTATCG GGTCGGCCGG CGTTTCCGAG GCGTTCACGA CGAAGCAGGT ACAGGCACTC
TTCGACGTGA ATGTATTCGG CATCCAGCGC ATGTCGAGAG CGGTATTGCC GACCTTCAGA
AAGCAGGGCG AAGGCCTGAT CGTGAACGTC GGCTCGATAC TCGGCCGCGT GACGTTTCCG
TTCTTCGGTC TCTATGGCGC ATCGAAGTTC GCGATCGAAG CGTTGACCGA CAGCTACCGC
TACGAATTGT CGACGTTGGG CATCGACGTC GTTCTCGTTC AACCGAGCAA CTATCCGACG
AATATCTTCG GCAGCGCGCA GCGGCCCGCC GACGCCGCGC GCGTGCCCGG CTACGGTGAA
GCCGGTGCGA TTCCGGACAA GATGGTCGAG ACGTTGATGA CGTTGTTCGC GAGCGACCAC
GCGCCGGACC CGCACGACGT CGCCGAAGCC ATCGCTCAAC TCGTCGAGCA AGCACCGGGC
ACGCGCCCCG CGCGTTGGGT CGTGGGTCAG TCATTCGGCG CCGACGCCCT CAACGCTCAA
GCAGCAGCGA TTCAGGCGCA GACACTGGAG AGTCTCGGGC TCGCGCACCT CGCCGGGCCG
CAAGGACAAT CCGCGGCGGC GTGA
 
Protein sequence
MRLRSSNLIG WETLNMSRTI LITGASSGFG RDTAETLSRA GHRVFASMRD VAGRNRPHAD 
ALRASGVQVV ELDVTDDASV ERGVASVLEH AGRLDVLINN AGIGSAGVSE AFTTKQVQAL
FDVNVFGIQR MSRAVLPTFR KQGEGLIVNV GSILGRVTFP FFGLYGASKF AIEALTDSYR
YELSTLGIDV VLVQPSNYPT NIFGSAQRPA DAARVPGYGE AGAIPDKMVE TLMTLFASDH
APDPHDVAEA IAQLVEQAPG TRPARWVVGQ SFGADALNAQ AAAIQAQTLE SLGLAHLAGP
QGQSAAA