Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0474 |
Symbol | |
ID | 5089988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 494303 |
End bp | 495043 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739869 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001192829 |
Protein GI | 146298238 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAG TATTAATAAC AGGAGCAAAT AGAAGCATAG GATTAGAAAT AACAAAACAG CTTTCAAAAC AGGGATTGTT TGTGTATTTA GGAAGCCGCG ATCTTGAAAA AGGAAACGAA ATTGTAAAAG AATTAAACAA AGATGGTTTT CAAAATATCA AAGCGATTCA AATTGATGTT ACCAATCCGG ATTCAATTTT AGCAGCAAAA AAGATTGTAG AAAACGAGCA GGGAAAATTA GATATCCTAA TCAACAATGC AGGAATAAGC GGCGGCCAGT TTCCTCAAAC TGCTTCAGAC ACCAGTGTTA AAGACATTAA AAATGTATTT GAAACTAACT TTTTTGGTGT TATAAGCGTT ACTCAGGCTT TTTTGGAATT ACTTAAAAAA TCAGACAGTC CGAGAATTAG TAATATAACT TCCGGACTTG GTTCTTTAAC TCTGCATAGT GATGCATCAT GGAAATATTA CGATTTTAAA TCAGCGGCTT ACGGAACTTC AAAAACAGCA TTAAATGCAT ATACCATTGT ACTGGCTTAT GAACTAAAAG ATTTATCTTT TAAAGTAAAT GCAATTGATC CGGGTTACAC GGCAACAGAC TTCAATCATT ATAGCGGTCC CGGAACTGTA GAAAGTGCAG CATCTTTTAT TATCAAACAT ACATTAACTG ATGAAAACGG ACCAACGGGA CAATTTTTCA GTAATGATAT TGAAGATGAA ACAGGGGTAA GTCCTTGGTA A
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Protein sequence | MKSVLITGAN RSIGLEITKQ LSKQGLFVYL GSRDLEKGNE IVKELNKDGF QNIKAIQIDV TNPDSILAAK KIVENEQGKL DILINNAGIS GGQFPQTASD TSVKDIKNVF ETNFFGVISV TQAFLELLKK SDSPRISNIT SGLGSLTLHS DASWKYYDFK SAAYGTSKTA LNAYTIVLAY ELKDLSFKVN AIDPGYTATD FNHYSGPGTV ESAASFIIKH TLTDENGPTG QFFSNDIEDE TGVSPW
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