| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1599 |
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| Symbol | |
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| ID | 5058057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1820126 |
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| End bp | 1820908 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473872 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001158443 |
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| Protein GI | 145594146 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATGA CGGATCTTTT CTCGGTTTCC GGCAAGACCG TCCTGGTCAC CGGCGGCTCG
CGCGGGATCG GCCGGATGAT TGCCGAGGGT TTCGTCCGGG CCGGCGCCAA GGTGATCATC
GCTGCCCGGA AGGCGGACGT CTGCACCGCG GTCGCCGGCG AACTGTCGAC GCTGGGCGAG
TGCACGGCGG TCCCCGTCGA CCTCAGCAGC GACGCCGGCG CCGAGGCGCT CGCCGCCGCC
GTACGAGAGC GGCACGACCG ACTCGACGTA CTGGTCAACA ACGCGGGTGC CACCTGGGGT
GCGCCACTGG AGGCCTATCC AGAGAGCGCG TTCGACAAAC TCTGGGCGGT CAACGTCAAG
GCCGTCTTCC GGCTCACCAC CGCCCTGCTG CCCGTACTGC GTGCGGCGGG CACCGCGGAC
GAGCCCGCCC GCGTCATCAA CATCGGCTCG GTGGACGGGA TCCGGGTCCC CTGGATGGAG
GTCTACGCGT ACTCCGCCAC GAAGGCCGCC GTGCACATGC TGACTCGCAG CCTCGCCCAC
CAACTCGCCA CCGAACACAT CACCGTCAAC GCGATCGCCC CGGGCCCGTT CGAGAGCAAG
ATGATGGCGT TCGCGCTGGA TGACCCCGCC TCCCGGGCAG CCATCGAGAA GCAGGTGCCG
CTGGGCCGCA TCGGCCGGCC GGAGGACATG GCGGGCACCG CGATCTACCT GTCGTCGCGG
GCCGGCGCGT ACCTGACCGG CGCGGTTATC CCCGTTGACG GCGGCATCAC CACCCACGGC
TGA
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| Protein sequence | MGMTDLFSVS GKTVLVTGGS RGIGRMIAEG FVRAGAKVII AARKADVCTA VAGELSTLGE
CTAVPVDLSS DAGAEALAAA VRERHDRLDV LVNNAGATWG APLEAYPESA FDKLWAVNVK
AVFRLTTALL PVLRAAGTAD EPARVINIGS VDGIRVPWME VYAYSATKAA VHMLTRSLAH
QLATEHITVN AIAPGPFESK MMAFALDDPA SRAAIEKQVP LGRIGRPEDM AGTAIYLSSR
AGAYLTGAVI PVDGGITTHG
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