| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0980 |
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| Symbol | |
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| ID | 3680243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1180732 |
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| End bp | 1181448 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637716314 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_321499 |
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| Protein GI | 75907203 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000633587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAA CTAAAAAAAT TGCTGTAGTT ACTGGCGGAA ACCGTGGTTT GGGATTTGAA
GCCTCCCGCC AATTGGCTAA AAAGGGATAC CTGGTAGTTC TCACTAGTCG GGACGAAGCT
AAAGGGAAAA CTGCGGCGGG AAAATTACAA GCTGAGGGTT TAGATGTGGT TGCTTATCCT
CTTGATGTCA CAAGTGAGAA AAGCAGTCAG CAATTAACCG AATTTATCCG TCAGGAGTTT
GGCAAAGTAG ATATTTTAAT TAACAATGCA GCAATATATA TTGATTCTCA AACTGGTAAT
AACAGCATTT TTCACACAAA AATAGAGACT TTACAGCAAA CAATAGATAC AAATGTTTAT
GGAGTTTTGC GAGTAACTCA GGCATTAATA CCCTTAATGC AAGAACAAAA CTATGGTCGA
ATTGTGAATG TTTCTTCCGG TGCTGGACAG TTAACTGATA TGGGTTCAGG TATACCCACA
TATCGCATTT CCAAAACAGC CTTAAATGCA CTGACGCGAA TTTTTGCCAA TGAATTAAAA
GGGACGAATA TTTTAGTTAA TTCTGTGTGT CCTGGTTGGG TTAAAACTGA TATGGGTGGG
CAAGATGCAC CACGAACCCC TGAAGAAGGA GTTGATACAA TTGTCTGGCT AGCAACTCTT
CCTGATGGTG GTGCATCTGG TGGTTTCTTC CGCGATCGCC AATCAATAGA TTGGTAA
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| Protein sequence | MSTTKKIAVV TGGNRGLGFE ASRQLAKKGY LVVLTSRDEA KGKTAAGKLQ AEGLDVVAYP
LDVTSEKSSQ QLTEFIRQEF GKVDILINNA AIYIDSQTGN NSIFHTKIET LQQTIDTNVY
GVLRVTQALI PLMQEQNYGR IVNVSSGAGQ LTDMGSGIPT YRISKTALNA LTRIFANELK
GTNILVNSVC PGWVKTDMGG QDAPRTPEEG VDTIVWLATL PDGGASGGFF RDRQSIDW
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