| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6143 |
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| Symbol | |
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| ID | 8362325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7742125 |
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| End bp | 7742943 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968273 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125752 |
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| Protein GI | 256425099 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.684326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGGA AGAGTCCCAC CTTTGAATCG TCAAAAATGA ATGACGACAT ACAAATTTCT
AAAGCACAAA AAATAGTTGA GATGAAAATA GCATTAGTTA CAGGGGCAAA TAAAAGTATT
GGTTTTGAAA CAGTCCGCAT ACTGGCAGGA CAAGGTTACC AGGTTTACCT CGGTAGCCGG
GACGTAGAAA ATGGAAAGGC AGCAGTTGCC AGCTTAAACG CACAGGGTTT ACAATCCATT
ACCCCGGTAC AGATAGACGT GACAGATCCT GCCTCTGTTG AACAGGCAAA AGCTTTTATC
GCAGAACAGT CCGGACATCT GGATATACTG GTGAATAATG CCGGTATCCT GGGTGATTTC
CCCCAGACAG CCGTAGCTGC TCCGATAGAA AGTATCCGGA AGGTATTTGA TACCAACTTC
TTCGGTACCA TCAATGTTAT ACAGACCTTC CTGGAATTGC TGTACAAGAG TCAATCACCT
GTTATCGTAA ATGTCACTTC CGGACTGGCC TCACTGACAT TACACAATGA TCCGGAATGG
ATTTACTATA AATACAAGAC GGCCAGCTAT GGTCCATCTA AAACTGCTTT GAATGCCTAC
ACGATCACGT TGGCTTCAGA GTTACAGGAA AAAGGATTTA AAGTGAATGT AGTGGATCCG
GGACATACCG CAACTGACTT CAACCGTCAT ACCGGTACAG GTACCGTAAC AAGTGCCGCT
GAGTTTGTGG CGCAATATGC GATGCTGGAG AGTGATGGGC CGACCGGTCA ATATTTTAGC
AAGGATATCC AGGAAGAGAG CAAGGTGAGT CCCTGGTAA
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| Protein sequence | MKGKSPTFES SKMNDDIQIS KAQKIVEMKI ALVTGANKSI GFETVRILAG QGYQVYLGSR
DVENGKAAVA SLNAQGLQSI TPVQIDVTDP ASVEQAKAFI AEQSGHLDIL VNNAGILGDF
PQTAVAAPIE SIRKVFDTNF FGTINVIQTF LELLYKSQSP VIVNVTSGLA SLTLHNDPEW
IYYKYKTASY GPSKTALNAY TITLASELQE KGFKVNVVDP GHTATDFNRH TGTGTVTSAA
EFVAQYAMLE SDGPTGQYFS KDIQEESKVS PW
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