More than 300 homologs were found in PanDaTox collection
for query gene Slin_5086 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_5086  response regulator receiver protein  100 
 
 
150 aa  308  1e-83  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00855008  normal 
 
 
-
 
NC_013730  Slin_1286  response regulator receiver protein  55.88 
 
 
149 aa  157  4e-38  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1229  response regulator receiver protein  30.15 
 
 
154 aa  84.7  4e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.22981 
 
 
-
 
NC_013730  Slin_5222  response regulator receiver protein  30.5 
 
 
160 aa  77.4  0.00000000000006  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_3379  response regulator receiver protein  31.79 
 
 
151 aa  73.6  0.0000000000008  Natrialba magadii ATCC 43099  Archaea  normal  0.100114  n/a   
 
 
-
 
NC_013730  Slin_4150  response regulator receiver protein  33.1 
 
 
160 aa  72.8  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4374  response regulator receiver protein  30.37 
 
 
155 aa  69.3  0.00000000002  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00391963  normal  0.990358 
 
 
-
 
NC_008609  Ppro_0902  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.03 
 
 
718 aa  67.4  0.00000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  0.651526  n/a   
 
 
-
 
NC_010571  Oter_0168  response regulator receiver protein  28.06 
 
 
179 aa  66.2  0.0000000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4644  response regulator receiver protein  31.72 
 
 
145 aa  64.3  0.0000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0382992  normal 
 
 
-
 
NC_013440  Hoch_4725  response regulator receiver protein  33.09 
 
 
138 aa  64.3  0.0000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1757  response regulator receiver  33.33 
 
 
149 aa  63.9  0.0000000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.282821  n/a   
 
 
-
 
NC_011901  Tgr7_1115  response regulator receiver protein  34.27 
 
 
149 aa  63.9  0.0000000007  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1826  response regulator receiver domain-containing protein  30.88 
 
 
148 aa  63.2  0.000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0284  response regulator receiver protein  34.12 
 
 
141 aa  62.4  0.000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0315  response regulator receiver protein  30.3 
 
 
141 aa  62.4  0.000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2718  response regulator receiver protein  31.72 
 
 
153 aa  62  0.000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.50209 
 
 
-
 
NC_013501  Rmar_2409  response regulator receiver protein  28.21 
 
 
151 aa  61.2  0.000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1055  two component signal transduction response regulator  34.48 
 
 
734 aa  61.2  0.000000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0148851  n/a   
 
 
-
 
NC_008148  Rxyl_0092  response regulator receiver protein  32.12 
 
 
152 aa  60.8  0.000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1192  response regulator receiver domain-containing protein  34.72 
 
 
147 aa  60.8  0.000000006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0582118  normal 
 
 
-
 
NC_008228  Patl_4153  response regulator receiver protein  28.57 
 
 
152 aa  60.5  0.000000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0753  response regulator receiver protein  27.27 
 
 
146 aa  60.5  0.000000008  Spirosoma linguale DSM 74  Bacteria  normal  0.621173  normal 
 
 
-
 
NC_010803  Clim_0176  response regulator receiver protein  30.47 
 
 
124 aa  59.7  0.00000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4344  response regulator receiver domain-containing protein  28.47 
 
 
146 aa  59.7  0.00000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.676678  normal 
 
 
-
 
NC_008009  Acid345_0504  response regulator receiver modulated metal dependent phosphohydrolase  34.86 
 
 
427 aa  60.1  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4222  response regulator receiver protein  25.69 
 
 
144 aa  60.1  0.00000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_3328  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32 
 
 
711 aa  60.1  0.00000001  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0679  response regulator receiver protein  32.06 
 
 
144 aa  59.3  0.00000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.145382  normal  0.0176538 
 
 
-
 
NC_007614  Nmul_A0163  response regulator receiver domain-containing protein  28 
 
 
137 aa  58.9  0.00000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3513  response regulator receiver domain-containing protein  31.29 
 
 
150 aa  58.9  0.00000002  Polaromonas sp. JS666  Bacteria  normal  0.126367  normal  0.123274 
 
 
-
 
NC_008025  Dgeo_1899  response regulator receiver protein  32.81 
 
 
139 aa  59.3  0.00000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.727216  normal  0.206125 
 
 
-
 
NC_011138  MADE_01274  putative two-component response regulator  26.9 
 
 
150 aa  59.3  0.00000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4420  response regulator receiver protein  32.12 
 
 
149 aa  58.2  0.00000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.390394 
 
 
-
 
NC_008228  Patl_3542  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  30.91 
 
 
590 aa  58.9  0.00000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2540  response regulator receiver protein  26.71 
 
 
150 aa  58.2  0.00000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_22950  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.25 
 
 
146 aa  57.8  0.00000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.213656 
 
 
-
 
NC_007614  Nmul_A2385  response regulator receiver domain-containing protein  28 
 
 
137 aa  57.8  0.00000005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.849023  n/a   
 
 
-
 
NC_007948  Bpro_3512  response regulator receiver domain-containing protein  29.37 
 
 
150 aa  57.8  0.00000005  Polaromonas sp. JS666  Bacteria  normal  0.592796  normal  0.130265 
 
 
-
 
NC_013757  Gobs_1518  response regulator receiver modulated diguanylate cyclase  31.58 
 
 
767 aa  57.4  0.00000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0706082  n/a   
 
 
-
 
NC_013745  Htur_4516  response regulator receiver protein  23.91 
 
 
143 aa  57.4  0.00000006  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013158  Huta_1869  response regulator receiver protein  24.11 
 
 
146 aa  57.4  0.00000007  Halorhabdus utahensis DSM 12940  Archaea  normal  0.124922  n/a   
 
 
-
 
NC_007777  Francci3_2153  response regulator receiver protein  30.37 
 
 
167 aa  57.4  0.00000007  Frankia sp. CcI3  Bacteria  normal  0.0689732  normal  0.426146 
 
 
-
 
NC_011729  PCC7424_1420  response regulator receiver protein  27.82 
 
 
143 aa  57.4  0.00000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_003910  CPS_1619  DNA-binding response regulator  27.78 
 
 
185 aa  57  0.00000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.208637  n/a   
 
 
-
 
NC_013037  Dfer_3324  response regulator receiver protein  30.43 
 
 
143 aa  57  0.00000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1811  response regulator receiver protein  27.59 
 
 
153 aa  57  0.00000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.121023 
 
 
-
 
NC_011884  Cyan7425_3768  GAF sensor hybrid histidine kinase  31.82 
 
 
1954 aa  57  0.00000009  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4464  response regulator receiver domain-containing protein  34.55 
 
 
250 aa  57  0.00000009  Polaromonas sp. JS666  Bacteria  normal  normal  0.579086 
 
 
-
 
NC_010725  Mpop_0540  response regulator receiver protein  29.29 
 
 
153 aa  57  0.00000009  Methylobacterium populi BJ001  Bacteria  normal  0.526175  normal 
 
 
-
 
NC_013132  Cpin_7209  response regulator receiver protein  28.71 
 
 
149 aa  56.6  0.0000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.768943  normal 
 
 
-
 
NC_013730  Slin_0384  response regulator receiver protein  29.93 
 
 
143 aa  56.2  0.0000001  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.499029 
 
 
-
 
NC_013440  Hoch_4791  response regulator receiver protein  26.81 
 
 
147 aa  56.6  0.0000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.612255  normal 
 
 
-
 
NC_008609  Ppro_3011  response regulator receiver protein  30.6 
 
 
145 aa  56.6  0.0000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0415054  n/a   
 
 
-
 
NC_014151  Cfla_1578  response regulator receiver protein  27.7 
 
 
145 aa  56.6  0.0000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.649884  normal  0.339688 
 
 
-
 
NC_008345  Sfri_4005  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  28.7 
 
 
696 aa  56.6  0.0000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0782  response regulator receiver protein  26 
 
 
160 aa  56.6  0.0000001  Maricaulis maris MCS10  Bacteria  hitchhiker  0.00636968  normal  0.0949177 
 
 
-
 
NC_011884  Cyan7425_2205  multi-sensor hybrid histidine kinase  32.56 
 
 
887 aa  55.8  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.188088 
 
 
-
 
NC_013737  Slin_7056  response regulator receiver protein  32.31 
 
 
132 aa  55.8  0.0000002  Spirosoma linguale DSM 74  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3218  response regulator receiver domain-containing protein  29.05 
 
 
150 aa  55.5  0.0000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000302211  hitchhiker  0.000261654 
 
 
-
 
NC_007604  Synpcc7942_1356  response regulator receiver domain-containing protein  27.78 
 
 
151 aa  55.8  0.0000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0665  response regulator receiver domain-containing protein  25.17 
 
 
148 aa  55.5  0.0000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0133  response regulator receiver protein  25.18 
 
 
149 aa  55.8  0.0000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2174  response regulator receiver modulated metal dependent phosphohydrolase  29.03 
 
 
474 aa  55.8  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4198  response regulator receiver domain-containing protein  31.16 
 
 
146 aa  55.5  0.0000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2360  response regulator receiver protein  32.06 
 
 
523 aa  55.8  0.0000002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2436  response regulator receiver protein  27.89 
 
 
144 aa  55.5  0.0000002  Frankia sp. EAN1pec  Bacteria  normal  0.287992  normal  0.438631 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  34.17 
 
 
209 aa  55.5  0.0000003  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_011884  Cyan7425_2819  response regulator receiver protein  25.88 
 
 
147 aa  55.5  0.0000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0636821 
 
 
-
 
NC_013037  Dfer_0507  response regulator receiver protein  27.69 
 
 
299 aa  55.5  0.0000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2120  two component transcriptional regulator, winged helix family  32.41 
 
 
238 aa  55.1  0.0000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1288  response regulator receiver domain-containing protein  25.6 
 
 
137 aa  55.1  0.0000004  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5179  response regulator receiver protein  30.51 
 
 
292 aa  54.7  0.0000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.172349 
 
 
-
 
NC_012918  GM21_2710  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.09 
 
 
704 aa  54.7  0.0000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00325078 
 
 
-
 
NC_002939  GSU2287  response regulator  33.05 
 
 
136 aa  54.7  0.0000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1506  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.97 
 
 
704 aa  54.3  0.0000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0605  adenylate/guanylate cyclase  36.75 
 
 
355 aa  54.3  0.0000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.657653  n/a   
 
 
-
 
NC_013093  Amir_2912  response regulator receiver protein  26.4 
 
 
141 aa  54.7  0.0000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_5135  response regulator receiver protein  25.19 
 
 
146 aa  54.3  0.0000006  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00000000600577 
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.85 
 
 
994 aa  54.3  0.0000006  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_011899  Hore_20270  response regulator receiver modulated CheB methylesterase  31.53 
 
 
339 aa  54.3  0.0000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2817  response regulator receiver protein  25 
 
 
148 aa  54.3  0.0000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0947814 
 
 
-
 
NC_007298  Daro_2788  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.2 
 
 
715 aa  53.9  0.0000007  Dechloromonas aromatica RCB  Bacteria  normal  0.941936  normal 
 
 
-
 
NC_007406  Nwi_1755  response regulator receiver  26.06 
 
 
146 aa  53.9  0.0000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.131899  normal  0.135934 
 
 
-
 
NC_007498  Pcar_2566  two component signal transduction response regulator  30 
 
 
151 aa  53.9  0.0000007  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0749  response regulator receiver protein  27.7 
 
 
156 aa  53.9  0.0000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4152  response regulator receiver protein  28.57 
 
 
147 aa  53.9  0.0000007  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.336467 
 
 
-
 
NC_008576  Mmc1_1726  putative PAS/PAC sensor protein  33.05 
 
 
504 aa  53.9  0.0000007  Magnetococcus sp. MC-1  Bacteria  normal  0.0909206  normal  0.287685 
 
 
-
 
NC_011726  PCC8801_4112  response regulator receiver protein  28.57 
 
 
147 aa  53.9  0.0000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU1038  sensory box histidine kinase/response regulator  31.86 
 
 
513 aa  53.9  0.0000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3261  response regulator  30.77 
 
 
150 aa  53.9  0.0000008  Geobacter sulfurreducens PCA  Bacteria  normal  0.360418  n/a   
 
 
-
 
NC_011662  Tmz1t_2198  response regulator receiver protein  28.89 
 
 
152 aa  53.9  0.0000008  Thauera sp. MZ1T  Bacteria  normal  0.718868  n/a   
 
 
-
 
NC_008025  Dgeo_0043  response regulator receiver protein  28.89 
 
 
144 aa  53.5  0.0000008  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.304768 
 
 
-
 
NC_008553  Mthe_0407  response regulator receiver protein  30.47 
 
 
142 aa  53.9  0.0000008  Methanosaeta thermophila PT  Archaea  normal  0.177022  n/a   
 
 
-
 
NC_007298  Daro_1573  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, dimerization and phosphoacceptor region  41.27 
 
 
373 aa  53.5  0.0000009  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1560  response regulator receiver domain-containing protein  27.34 
 
 
143 aa  53.5  0.0000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.126493 
 
 
-
 
NC_013440  Hoch_1357  response regulator receiver protein  33.72 
 
 
148 aa  53.5  0.0000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.463554  normal  0.0634619 
 
 
-
 
NC_008390  Bamb_1597  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  30.28 
 
 
860 aa  53.5  0.0000009  Burkholderia ambifaria AMMD  Bacteria  normal  0.711633  n/a   
 
 
-
 
NC_010505  Mrad2831_4269  response regulator receiver protein  27.27 
 
 
153 aa  53.5  0.000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.306283 
 
 
-
 
NC_008609  Ppro_2726  response regulator receiver protein  31.08 
 
 
145 aa  53.5  0.000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
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