| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3328 |
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| Symbol | |
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| ID | 4625742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4109152 |
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| End bp | 4111287 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639798438 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_944614 |
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| Protein GI | 119946934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAGAG TATTAGTGGT TGATGATGAT ATCACCGCCC GGCTTATGGC CCGTCAGGCG
TTGGGCAAAG AAAACTTTGC TGTTATAGAA GCTGAAGATG GCTTTGCTGC ATTAGCGTTA
TTTGAGGCGG TACAGCCGGA TATTGTGCTG CTGGATGTCG AAATGCCGGG CATGAATGGT
TTTGAAGTCT GCAGACAACT GCGCCGTTTT CCCTGCGGTA AATTAGTACC GATACTGATG
GCAACCGGAC AGGATGATCT GGATTCGGTA CGTCAGGCTT ATGAAGCGGG TGCCACCGAT
TTTGTCACTA AACCGTTTAA TTGGAAGATT CTGGCACACC GATTACGCTA CATGGTAAGG
GCCAGTGATA TTACCGAACA GTTAGAGGAA TTGCAGAAAA GTGAATCACG CTTAGGTAAT
GCTCAGCGTA TCGCTCGCCT GGGTAATTGG GAGTGGGACC TTAAGAGTAA TGAAATTTAC
TGGTCAGAAC AGCTTTATCA TATGCTGTGG TTACGTCGCG GCGTTGCTAA ACCAAGCTTT
CGCGGTTTTA TCAGCAGACT GCCTCATGGC GAACGAAAAG ATTTCATGGG CTGGATTCAG
GGTCTGCGGC ATGGTGCCAA GGAAGAACAA CGAGGCGGCT GGAATCATAG TCTTAATCAA
GCTGACGGCA GTCGCCTGAA TGTGCAGCAT CAGGCTGAAG TGTTCTATGA CGAAAACGGT
GCTGCCAAGG TGGTATCGGG TACCGTGGTT GACGTGACTG AATTGACACA AGCACAAGAC
CAAATTCTTC AGCTGGCTCA CTTTGATAGC CTTACCGGAT TGGCTAACCG CAATGCCTTT
CGGAAACGGG TCGAGCTAGC GATGGAACGG GCAAAACAGT ATGGTCACCT TGGGGCGGTT
TTATTTCTGG ATCTGGATAA CTTTAAAAGA ATTAACGATA CCCTTGGACA CAGCATCGGT
GATCAACTTT TACAAGAAGT GGCCAGACGT TTAACCGACA TTGTTCGCGG TAGTGATAGT
ATCTGCGGTA CGAATTTTAA CCATGCAATA GATGATAATC TGATTTCCCG TCTTGGTGGT
GATGAATTTA CAGTATTATT GCCTGAGATC GGAAAAATAA AAGATGCGGA ACATGCTGCC
AGAAGAGTGC TTAATTCGAT CGGGGACATT ATTAATCTTT CTGGTCATGA CATTGTTGTC
ACCCCGAGCA TTGGTATAGC GATCTTCCCG CATCATGGTG AAAATGTTGA TAGCCTGCTT
AAAAATGCTG ATGCTGCTAT GTATTACGTT AAGCGTGCGG GCAAGAATGA CTATGAACTG
TTTGTTAACT CCATGAATGT TGTGGCGAAA CGTCGCCTGG AACTGGAAAG TTTTTTACGG
CATGCTATTG ATAATAAAGA ACTTTCGGTC AACTACCAGC CGCAAATTGA TATTCCGACT
GGGCGTATTA TTGGTGCCGA AGCCCTGCTC CGTTGGAATA GTGCTGAACT TGGAATGGTT
TCTCCGGTTG AATTTATTCC GATCGCGGAG GAGACCGGAT TAATTTCACC AATTGGCGAG
TGGGTGCTCA GAGAAGCGTG TCGTCAGGTT AAAGAATGGC GAGATGATGG CTTGCCTGAG
ATTCAGATTG CAGTGAATAT ATCAGTGCAG CAGTTCGCTA AACAGAGTCT TGATAAATTG
GTATCAAAAG TGTTGTTAGA GACGGGTCTG CCAGTTCATT GTCTGGAGCT TGAGATCACT
GAGAATATGT TGATGGACGA TGTCGAAGGT GCTGTTGAGA CCTTACATAA ACTGAAAGAT
TTAGGTATCA ATCTGGCGAT AGATGACTTT GGCACCGGCT ATTCAAGCCT GAGTTATCTG
AAACGTTTCC CGATCGATAA GCTTAAAATT GACCGCTCCT TTATTACCTA TGTGACCACT
GAACCTAGCG ATGCCGCGGT CACTCAGGCG ATTATTTCAA TGGCACATAA TTTGGGGTTA
ACGGTGATAG CGGAAGGTGT GGAAGAGGCA TCTCAACTGG AATTTTTACG TCAGCATCAT
TGCGAAGAAA TGCAGGGCTA TTATTTTAGC AGACCGCTGA TTGCATCGGA TATGGAAGCT
TTGTTGCGCA GCCATAAAGG CTCGCCAAAG ATTTGA
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| Protein sequence | MTRVLVVDDD ITARLMARQA LGKENFAVIE AEDGFAALAL FEAVQPDIVL LDVEMPGMNG
FEVCRQLRRF PCGKLVPILM ATGQDDLDSV RQAYEAGATD FVTKPFNWKI LAHRLRYMVR
ASDITEQLEE LQKSESRLGN AQRIARLGNW EWDLKSNEIY WSEQLYHMLW LRRGVAKPSF
RGFISRLPHG ERKDFMGWIQ GLRHGAKEEQ RGGWNHSLNQ ADGSRLNVQH QAEVFYDENG
AAKVVSGTVV DVTELTQAQD QILQLAHFDS LTGLANRNAF RKRVELAMER AKQYGHLGAV
LFLDLDNFKR INDTLGHSIG DQLLQEVARR LTDIVRGSDS ICGTNFNHAI DDNLISRLGG
DEFTVLLPEI GKIKDAEHAA RRVLNSIGDI INLSGHDIVV TPSIGIAIFP HHGENVDSLL
KNADAAMYYV KRAGKNDYEL FVNSMNVVAK RRLELESFLR HAIDNKELSV NYQPQIDIPT
GRIIGAEALL RWNSAELGMV SPVEFIPIAE ETGLISPIGE WVLREACRQV KEWRDDGLPE
IQIAVNISVQ QFAKQSLDKL VSKVLLETGL PVHCLELEIT ENMLMDDVEG AVETLHKLKD
LGINLAIDDF GTGYSSLSYL KRFPIDKLKI DRSFITYVTT EPSDAAVTQA IISMAHNLGL
TVIAEGVEEA SQLEFLRQHH CEEMQGYYFS RPLIASDMEA LLRSHKGSPK I
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