| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1506 |
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| Symbol | |
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| ID | 6781494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1743585 |
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| End bp | 1745699 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767500 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002138320 |
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| Protein GI | 197117893 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTA GGAAAGCAAA GCGCAGCACA CCGCTCGTCA TGGTCGTGGA CGACGACCAG
GCAGTGCGCC TTCTGGCCCG GGAGACCCTG GAGAACTCCG GCTTCGCCGT GCGCGACGTG
GAAAACGGCG AGCAGGCGCT GGAGGAGTTC GATGTGCACG CGCCAGACAT CGTGCTCCTG
GACGTGATGA TGCCGGGCAT CGACGGCTTC TCCGTCTGCA GCGCCATCCG GCGCACCGCC
TCCGGGCGGG ACACGCCGGT TTTGATGATG ACCGGCCTGG ACGACCTGGA GTCAATAGAC
TGCGCCTACG AGGCGGGGGC CACCGATTTC ATCACCAAAC CGATCAACTG GCACGTGCTC
GGGTACCGGG TGAGCTACAT GCTGAGGGCG AGCGGCGCCC TGGAGCAGTT GAGGGAGAGC
AGGGCGGGCT TAGCTCACGC CCAGAGCCTC GCCCATATCG GGAGTTGGGA GTGGGACCTC
GTTACCGGCG AGATCCGGTG CTCCGAGGAG GTCTACAGCA TCTGCAGCAT CGAGCGCTCT
TTCAAAGGGG GAAACCCCAT CCTCGACCCG GTGCACCCCC TGGACCGCGG TTTCGTGCAG
GGATCCATCG ACGAGGCGAT CGGCAAGCGC GCACCGCTTT CCTTCGACTA TCGGATCACG
CTGGGGGGGG GAGAGCGCAC CCTGCACGCC GAGCTGGTGA CGGTACTGGA CGAGCAGGGC
GAGGCTGTCT GCTTAACTGG AACTATCCAG GACATCACCG AGAGAAAGCG CGCCGAGGAA
CAGATCCGGC TCCTGGCTTA CTACGACGCG CTGACCGGCC TTCCCAACCG CCGCTTCTTC
CTGCAGCAGT TGGAGCAGGC CCTGGTCTTC GCCAACCGCT ACGACCGGAT GCTCGCGGTC
CTCTTCCTCG ACCTGGACCG CTTCAAGCTC GTCAACGACA CCCTCGGGCA CGGGGTAGGG
GACCGCCTGC TGCAGGACGT GGCCGACCGG CTGCTGCGCT GCGTCCGCAG AGGGGACTGT
CTCGCCCGCG CCGACGAGGA GTGCCCGCCG TCCCTGGTCT CGCGCCTGGG AGGGGACGAG
TTCACCATCA TGCTCTCCGA CATAGAGCAC TTCCAGGACG TGGCCAAGAT CGCCCGCCGA
ATCCTTGAGG CAGTTTCAGT TCCCTACTCG CTAGAAGGGC AGGAGGTTTT CGTCTCCACC
AGCATCGGCA TCAGCCTCTA CCCCTTCGAC GCCACTACGG CGAGCGACCT GATCCGGAAC
GCGGACGGCG CCATGTACCA GGCCAAGGAA CAGGGGAGAA ACGGCTACCA GATCTACGAC
GAGTCCATGA ACGCCAAGGC GCTGGAGCGG ATCATACTGG AAAGCCAGCT GCACAAGGCG
CTCAAGGAGG AGGAATTCAT CGTCTACTAC CAGCCGCAGG TCTCAAACCA AAGCGGACGT
GTGGTGGGGA TTGAGGCGCT GGTGCGCTGG AACTCCAAGG AACTGGGCCT CGTCGAACCG
GGGCGTTTCC TACCGCTGGC CGAGGAGATC GGGCTGGTGA TCCAGATCGA CCAGTGGGTG
ATGCGGGAAG CATGCCGGCA ACACAAGCTC TGGCTGGACG CGGGGTTCCC GCCGGTGACG
CTTGCCATCA ACATCTCAGG CCAGCAATTC ATGAAAAACG AGCTTTTGGA GACGGTGACC
TCGGTCCTGA AAGAGAGCGG GCTCGACCCG GGGCTTTTGG AACTGGAACT TACCGAGGGA
GTGCTCATGG CGCACACCGA ACGCACTGTA AAGACGCTGC AGGCCCTGAA AGGGATGGGG
GTGAGGCTCG CCATCGACGA CTTCGGGACC GGCTTCTCCT CGCTCTCCTA TTTAAAGCGC
TTCCCGCTTG ACGTCCTCAA GATCGACCGG ACCTTTATCA ATGACATCAC CACCGACCCC
GACGACGCCG CCATCACCCT CGCCACCATC GAGATGGCGC ACACGATGAA GCTGAAGGTG
ATCGCGGAGG GGGTCGAGAC CAAGCCCCAG CTCGACTTCC TCACCAAAAA CGGCTGCGAC
ATGTACCAGG GTTACCTCTT CAGTAAACCG GTCCCCTCTA CGGAGCTTCC CCGCCTTTTC
AACCGCTGGC AGTAG
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| Protein sequence | MLTRKAKRST PLVMVVDDDQ AVRLLARETL ENSGFAVRDV ENGEQALEEF DVHAPDIVLL
DVMMPGIDGF SVCSAIRRTA SGRDTPVLMM TGLDDLESID CAYEAGATDF ITKPINWHVL
GYRVSYMLRA SGALEQLRES RAGLAHAQSL AHIGSWEWDL VTGEIRCSEE VYSICSIERS
FKGGNPILDP VHPLDRGFVQ GSIDEAIGKR APLSFDYRIT LGGGERTLHA ELVTVLDEQG
EAVCLTGTIQ DITERKRAEE QIRLLAYYDA LTGLPNRRFF LQQLEQALVF ANRYDRMLAV
LFLDLDRFKL VNDTLGHGVG DRLLQDVADR LLRCVRRGDC LARADEECPP SLVSRLGGDE
FTIMLSDIEH FQDVAKIARR ILEAVSVPYS LEGQEVFVST SIGISLYPFD ATTASDLIRN
ADGAMYQAKE QGRNGYQIYD ESMNAKALER IILESQLHKA LKEEEFIVYY QPQVSNQSGR
VVGIEALVRW NSKELGLVEP GRFLPLAEEI GLVIQIDQWV MREACRQHKL WLDAGFPPVT
LAINISGQQF MKNELLETVT SVLKESGLDP GLLELELTEG VLMAHTERTV KTLQALKGMG
VRLAIDDFGT GFSSLSYLKR FPLDVLKIDR TFINDITTDP DDAAITLATI EMAHTMKLKV
IAEGVETKPQ LDFLTKNGCD MYQGYLFSKP VPSTELPRLF NRWQ
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