Gene Francci3_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2153 
Symbol 
ID3905543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2522041 
End bp2522544 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID637879488 
Productresponse regulator receiver protein 
Protein accessionYP_481254 
Protein GI86740854 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0689732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.426146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCG AAAGACCGAA CATTCTGCTG GTGGAGGATG ATCCCGACGA TATCGAACTT 
ACCCTGCACG CGCTGCATAC AAAGAACATC ATGGCTTCGA TCGAGGTTCT CCGGGACGGA
GCCGAGGCGC TCGCCTTCCT CTTCCGTACC GGCCCCTACG CCGACCGGTC GCCGGACAGG
GATCCGAAGG TCGTTCTACT CGATCTCAAG CTGCCGAAGG TCGACGGCCT GGAGGTCCTG
CAACGACTGA AAGGCGACCC GGCCCTTCGG ACCGTGCCGG TGGTGATGCT GACTTCCTCC
CACGAGGAAC GGGACATCGT GGCCAGCTAC GATCTCGGCG TCAACAGCTA CATCGTCAAA
CCGGTCGACT TCGGCCAGTT CACCGAGGCG GTGCGGACGG CGGGAATGTA CTGGCTGCTG
CTCAACCGGC AGTCCACCCA GAACACCCAG AGCGATGCCG ATTCCGGTGC CAATGCCGAT
GCCTCACCCG CCGCGGAAGG GTGA
 
Protein sequence
MNIERPNILL VEDDPDDIEL TLHALHTKNI MASIEVLRDG AEALAFLFRT GPYADRSPDR 
DPKVVLLDLK LPKVDGLEVL QRLKGDPALR TVPVVMLTSS HEERDIVASY DLGVNSYIVK
PVDFGQFTEA VRTAGMYWLL LNRQSTQNTQ SDADSGANAD ASPAAEG