Gene Synpcc7942_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1356 
Symbol 
ID3775549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1390895 
End bp1391350 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content49% 
IMG OID637799787 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_400373 
Protein GI81300165 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCCA AGACCGTGCA CATTCTGATT GCAGATGATG ATCAAGACGA TTGCTTGATG 
ACACGGGAGG CCTTTAAAGA GTGCAGGATC GCCAACCCCC TCCACTTTGT CCATGATGGC
GAAGCCCTCT TGGATTACCT CAAACGGCGC TCTCCCTATA CTGATGACCA GCGTTTTCCT
TTGCCGGGGC TCATTCTTCT CGATCTCAAT ATGCCGCTGA AAGATGGCCG CGAGGCACTC
GCTGAGATCA AATCCGATCC AGAATTACGA TCAATTCCAG TCGTTATTTT AACGACCTCA
TCAGCTGACG AGGATATTTT GCACAGCTAC AACATTGGTG TTAATTCTTT CATCACGAAG
CCTATTAGTT TCTCGGGCTT GATAGAGGTA ATCTGCGCTT TGGGTCGTTA CTGGCTAGAT
ATCGTTGAGT TGCCAAGCGA GAACCGCGGA GCATGA
 
Protein sequence
MRPKTVHILI ADDDQDDCLM TREAFKECRI ANPLHFVHDG EALLDYLKRR SPYTDDQRFP 
LPGLILLDLN MPLKDGREAL AEIKSDPELR SIPVVILTTS SADEDILHSY NIGVNSFITK
PISFSGLIEV ICALGRYWLD IVELPSENRG A