Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4153 |
Symbol | |
ID | 4175942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4994432 |
End bp | 4994890 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638057189 |
Product | response regulator receiver protein |
Protein accession | YP_663706 |
Protein GI | 109900451 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTTTTA CAAAAGCTAA ACCAATCGTA ATATTAATGG CAGATGACGA TGAAGACGAT CGTCTGCTCG CACAAGACGC CTTGCGCGAA AGTCGCGTAC TAAATGAATT GCACTGCGTG GAAGACGGTG TACAGCTGCT AGAGTATTTG CGCAAAGAAG GTAAATACAG CGAAGCTGAC GCCGCCCCAA GACCAGGGTT AATTTTACTT GATTTGAACA TGCCTCGAAT GGATGGTCGC GAAGCACTGG AGCAAATTAA ACTCGATCCA AATTTGCGCA GTATTCCTAT CGTTATTTTA ACCACGTCAG CCCAAGAAGA AGACATGGTG AAAGGCTACG ATTTAGGGGC TGCTTCCTAC ATCACCAAGC CAGTCACCTT TGAAGGCTTG GTCGCTCTGA TGAGTGCGCT AGGTAAGTAT TGGGTTGAGT TCGTAGAATT ACCTACCAGC AACAATTAA
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Protein sequence | MPFTKAKPIV ILMADDDEDD RLLAQDALRE SRVLNELHCV EDGVQLLEYL RKEGKYSEAD AAPRPGLILL DLNMPRMDGR EALEQIKLDP NLRSIPIVIL TTSAQEEDMV KGYDLGAASY ITKPVTFEGL VALMSALGKY WVEFVELPTS NN
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