| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7209 |
|---|
| Symbol | |
|---|
| ID | 8363403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 9009515 |
|---|
| End bp | 9009964 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644969343 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003126810 |
|---|
| Protein GI | 256426157 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.768943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA AGGTGTTACG TAGCAGGAAA TGTATACTTG TTGCAGATGA TGACGCAGAC
GACAAGGAAC TGATAAAGGT GGCCTTTGAA GAGAGTGGGG CAGACACTGA ATTGCGTTTT
GTCGAGAATG GAGAAGAATT GATGTTTTAT CTTAACAGGC AGGGTAAATA TGCCGATGAG
GAAAAGTATC CATTCCCCAG CATTATTTTG CTCGATCTGA ACATGCCGCG TAAAGACGGT
CGTGAAGCAC TGCGCGAAAT AAAGGAACAC GCCAGCCTGA AATGGTTGCC GATCATTATT
TTAACTACCT CTACAGAGGC GAAGGATATC TCAAAATGTT ATGAGCTGGG CGTAAATAGT
TATACGATCA AACCCGCCAA CTTTTCTGAC CTGGTAGCGT TTACCCGCAT GCTGCATACC
TATTGGTTTA CAGTTGTTCA GTTACCGTAG
|
|---|
| Protein sequence | MIKKVLRSRK CILVADDDAD DKELIKVAFE ESGADTELRF VENGEELMFY LNRQGKYADE
EKYPFPSIIL LDLNMPRKDG REALREIKEH ASLKWLPIII LTTSTEAKDI SKCYELGVNS
YTIKPANFSD LVAFTRMLHT YWFTVVQLP
|
|---|
| |