More than 300 homologs were found in PanDaTox collection
for query gene Saro_3840 on replicon NC_009426
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  100 
 
 
450 aa  939    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  42.99 
 
 
459 aa  361  2e-98  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  42.82 
 
 
456 aa  350  4e-95  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  41.53 
 
 
448 aa  338  9.999999999999999e-92  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  41.78 
 
 
427 aa  335  7e-91  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  40.28 
 
 
455 aa  327  3e-88  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  40.98 
 
 
453 aa  320  1.9999999999999998e-86  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  40.98 
 
 
453 aa  320  1.9999999999999998e-86  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  40.98 
 
 
453 aa  320  1.9999999999999998e-86  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02394  hypothetical protein  40.98 
 
 
453 aa  320  1.9999999999999998e-86  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  40.98 
 
 
453 aa  319  5e-86  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  40.76 
 
 
453 aa  318  9e-86  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  38.65 
 
 
446 aa  313  3.9999999999999997e-84  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  36.81 
 
 
447 aa  302  8.000000000000001e-81  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  39.26 
 
 
497 aa  301  2e-80  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  38.46 
 
 
456 aa  297  2e-79  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  37.08 
 
 
459 aa  293  5e-78  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  35.81 
 
 
447 aa  288  2e-76  Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  37.19 
 
 
450 aa  286  8e-76  Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  36.59 
 
 
435 aa  276  4e-73  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  36.87 
 
 
423 aa  248  2e-64  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  35.48 
 
 
505 aa  245  9.999999999999999e-64  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  31.94 
 
 
466 aa  234  2.0000000000000002e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  31.32 
 
 
466 aa  235  2.0000000000000002e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  31.55 
 
 
466 aa  234  3e-60  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  31.55 
 
 
466 aa  234  3e-60  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  31.55 
 
 
466 aa  234  3e-60  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  233  6e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  233  6e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  233  6e-60  Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  32.24 
 
 
447 aa  232  9e-60  Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  32.24 
 
 
447 aa  232  9e-60  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  232  9e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  232  1e-59  Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  232  1e-59  Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
463 aa  232  1e-59  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  32.44 
 
 
455 aa  230  4e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  32.81 
 
 
458 aa  230  4e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  32.81 
 
 
458 aa  230  4e-59  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  32.87 
 
 
455 aa  230  4e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  32.87 
 
 
458 aa  229  7e-59  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  32.87 
 
 
455 aa  229  1e-58  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  32.87 
 
 
455 aa  229  1e-58  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  32.87 
 
 
455 aa  229  1e-58  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  32.6 
 
 
471 aa  228  2e-58  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  32.6 
 
 
471 aa  228  2e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  32.6 
 
 
471 aa  228  2e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  32.6 
 
 
471 aa  228  2e-58  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  32.17 
 
 
471 aa  228  2e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  32.6 
 
 
471 aa  228  2e-58  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  32.6 
 
 
471 aa  228  2e-58  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  30.61 
 
 
444 aa  227  3e-58  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  34.31 
 
 
438 aa  226  5.0000000000000005e-58  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  34.31 
 
 
438 aa  226  5.0000000000000005e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  34.31 
 
 
438 aa  226  5.0000000000000005e-58  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  34.31 
 
 
438 aa  226  5.0000000000000005e-58  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  34.31 
 
 
438 aa  226  5.0000000000000005e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  34.31 
 
 
438 aa  226  5.0000000000000005e-58  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  34.81 
 
 
438 aa  226  6e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  32.52 
 
 
467 aa  226  8e-58  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  32.52 
 
 
471 aa  226  8e-58  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  34.81 
 
 
438 aa  224  2e-57  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  34.81 
 
 
438 aa  224  2e-57  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  31.29 
 
 
484 aa  211  3e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  33.17 
 
 
458 aa  209  6e-53  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  31.13 
 
 
484 aa  209  9e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  31.09 
 
 
487 aa  208  1e-52  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  30.21 
 
 
483 aa  207  4e-52  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  29.63 
 
 
468 aa  206  5e-52  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  30.68 
 
 
484 aa  206  6e-52  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  30.68 
 
 
484 aa  206  6e-52  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  30.68 
 
 
483 aa  205  1e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_009485  BBta_3192  putative ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
432 aa  203  5e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  28.82 
 
 
467 aa  201  3e-50  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  30.48 
 
 
467 aa  197  4.0000000000000005e-49  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  28.29 
 
 
468 aa  196  8.000000000000001e-49  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_008699  Noca_0826  Rieske (2Fe-2S) domain-containing protein  32.09 
 
 
443 aa  195  1e-48  Nocardioides sp. JS614  Bacteria  normal  0.212221  n/a   
 
 
-
 
NC_009511  Swit_4174  Rieske (2Fe-2S) domain-containing protein  29.84 
 
 
440 aa  182  1e-44  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.000409814  normal  0.0305498 
 
 
-
 
NC_009511  Swit_2634  benzoate 1,2-dioxygenase, alpha subunit  30.65 
 
 
450 aa  178  2e-43  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4158  benzoate 1,2-dioxygenase, large subunit  27.92 
 
 
475 aa  176  7e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1177  Rieske (2Fe-2S) domain-containing protein  30 
 
 
452 aa  176  9e-43  Paracoccus denitrificans PD1222  Bacteria  normal  0.0599203  normal 
 
 
-
 
NC_007650  BTH_II0327  benzoate 1,2-dioxygenase, alpha subunit  29.02 
 
 
427 aa  174  2.9999999999999996e-42  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1324  benzoate 1,2-dioxygenase, large subunit  29.89 
 
 
442 aa  174  2.9999999999999996e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0648485 
 
 
-
 
NC_009511  Swit_1758  ring hydroxylating dioxygenase, alpha subunit  31.36 
 
 
428 aa  174  3.9999999999999995e-42  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2368  benzoate 1,2-dioxygenase, large subunit  29.3 
 
 
449 aa  174  3.9999999999999995e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1761  Rieske (2Fe-2S) domain-containing protein  29.6 
 
 
470 aa  172  7.999999999999999e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.104126 
 
 
-
 
NC_010086  Bmul_3238  Rieske (2Fe-2S) domain-containing protein  29.27 
 
 
452 aa  172  7.999999999999999e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.174297 
 
 
-
 
NC_010512  Bcenmc03_6131  Rieske (2Fe-2S) domain-containing protein  28.72 
 
 
452 aa  172  1e-41  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6299  Rieske (2Fe-2S) domain-containing protein  29.21 
 
 
452 aa  172  1e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00410726 
 
 
-
 
NC_010681  Bphyt_1591  Rieske (2Fe-2S) domain protein  29.51 
 
 
452 aa  172  1e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  0.109039  normal 
 
 
-
 
NC_008392  Bamb_6584  Rieske (2Fe-2S) domain-containing protein  29.81 
 
 
452 aa  172  1e-41  Burkholderia ambifaria AMMD  Bacteria  normal  0.208794  normal  0.710082 
 
 
-
 
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  29.77 
 
 
424 aa  172  1e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7046  ring hydroxylating dioxygenase, alpha subunit  28.42 
 
 
457 aa  171  2e-41  Burkholderia sp. 383  Bacteria  normal  normal  0.296981 
 
 
-
 
NC_007794  Saro_0538  Rieske (2Fe-2S) protein  29.97 
 
 
444 aa  171  2e-41  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1306  Rieske (2Fe-2S) region  28.46 
 
 
452 aa  171  2e-41  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6524  Rieske (2Fe-2S) domain-containing protein  28.46 
 
 
452 aa  171  2e-41  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5079  Rieske (2Fe-2S) domain-containing protein  29.08 
 
 
448 aa  171  3e-41  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.253861 
 
 
-
 
NC_009512  Pput_2898  ring hydroxylating dioxygenase, alpha subunit  29.41 
 
 
434 aa  170  4e-41  Pseudomonas putida F1  Bacteria  normal  0.502891  normal  0.614972 
 
 
-
 
NC_013757  Gobs_1297  benzoate 1,2-dioxygenase, large subunit  28.98 
 
 
458 aa  170  6e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4071  Rieske (2Fe-2S) domain-containing protein  30.28 
 
 
429 aa  169  8e-41  Mycobacterium sp. JLS  Bacteria  normal  0.177236  normal 
 
 
-
 
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