| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6584 |
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| Symbol | |
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| ID | 4315488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1274496 |
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| End bp | 1275854 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638154428 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_778462 |
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| Protein GI | 115361325 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.208794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.710082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA CGATCGACCC CACCACCGAA CTGGACCACC TGCTCGCCAC CGCCGTGCAG
GACGACAAGG AAGCCGGCAT CTTCCGCTGC CGCCGCGACA TCTTCACGAA CGAGGCGCTG
TACGCGCTCG AGATGAAGCA CATCTTCGAG CGCAACTGGG TGTACCTGGC GCACGAGAGC
CAGATCCCGA ACAACAACGA TTACTACACG ACGTGGATCG GCCGCCAGCC GGTCGTCATC
ACACGCGACA AGGCCGGCGA GCTGCACGCG GTGATCAATG CGTGCGCGCA CAAGGGTGCG
ATGCTGTGCC GCCGCAAGCA CGGCAACAAG GGCAGCTTCA CGTGCCCGTT CCACGGCTGG
ACCTTCTCGA ACACCGGCAA GCTGCTGAAG GTGAAGGACG AGAAGACGAC CGAGTATCCG
GTGCAGTTCA ACACGCACGG CTCGCACGAC CTGAAGAAGG TCGCGCGCTT CCAGAGCTAT
CGCGGCTTCC TGTTCGGCAG CCTGAGCGAC GACGTGCTGC CGCTCGAGGA CTACCTCGGC
GAGGCGCGCG TGATCATCGA CCAGATCGTC GACCAGGCGC CGAACGGGCT CGAAGTGCTG
CGCGGCAACT CCTCCTACAT CTACGAAGGC AACTGGAAGA TGCAGATGGA GAACGGCTGC
GACGGCTATC ACGTGAGCAC CGTGCACTGG AACTACGCGG CGACGATGGG CCGCCGCAAG
GAAGACGGCA CCAAGGCCGT CGATGCGAAC AGCTGGAGCA AGTCGGTCGC GGGCGTGTAC
GGCTTCGACA ACGGCCACAT CCTGCTGTGG ACCAAGACGA TGAACCCGGA AGTGCGGCCG
GTGTACCAGC ACCGCGACGA GATCGAGGCG CGCGTGGGCG CGGCGCAGGC CGACTTCATC
GTGAACCAGA CGCGCAACCT GTGCGTGTAC CCGAACGTGT TCCTGATGGA CCAGTTCAGC
ACGCAGATCC GCGTGGTGCG TCCGCTCGGC GTCGACAAGA CCGAAGTCAG CATCTTCTGC
TTCGCGCCGA AAGGCGAGAG CGAAGCCGAC CGCACGACGC GGATCCGCCA GTACGAGGAT
TTCTTCAACG TGACCGGGAT GGGCACGGCC GACGATCTCG AGGAATTCCG CGCGTGCCAG
GCCGGCTACG CGGGCATCAC GGCGATGTGG AACGACCTGT CGCGCGGCGC GCCGCTGTGG
GTCCACGGGC CGGACGAGAA CGCGAAGAAG ATGGGGCTGA ACCCGCGCAT TTCGGGCGAG
CGCAGCGAGG ACGAAGGGCT GTTCGTGTGC CAGCACGAAC ACTGGGTGCA CGTGATGCGC
GATGCACTGA AGAAGGAACG CGCGGAGGTG GCGGCATGA
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| Protein sequence | MSATIDPTTE LDHLLATAVQ DDKEAGIFRC RRDIFTNEAL YALEMKHIFE RNWVYLAHES
QIPNNNDYYT TWIGRQPVVI TRDKAGELHA VINACAHKGA MLCRRKHGNK GSFTCPFHGW
TFSNTGKLLK VKDEKTTEYP VQFNTHGSHD LKKVARFQSY RGFLFGSLSD DVLPLEDYLG
EARVIIDQIV DQAPNGLEVL RGNSSYIYEG NWKMQMENGC DGYHVSTVHW NYAATMGRRK
EDGTKAVDAN SWSKSVAGVY GFDNGHILLW TKTMNPEVRP VYQHRDEIEA RVGAAQADFI
VNQTRNLCVY PNVFLMDQFS TQIRVVRPLG VDKTEVSIFC FAPKGESEAD RTTRIRQYED
FFNVTGMGTA DDLEEFRACQ AGYAGITAMW NDLSRGAPLW VHGPDENAKK MGLNPRISGE
RSEDEGLFVC QHEHWVHVMR DALKKERAEV AA
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