| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1761 |
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| Symbol | |
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| ID | 5455622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1913585 |
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| End bp | 1914997 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640877342 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001413037 |
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| Protein GI | 154252213 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.104126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAT CCGGCGTGAG CAACCCATTC GATCGCATTC GCCACGGTCT CGATTCATGG
CTTGTCGAGG ATACGTCGAG CGGGCGCTTC ATGCTCGACC GCGCCATATT CACCGATCCC
GAGTTGTTCG CTCTTGAGAT GAAGCACATC TTCGAGCGCA ACTGGGTGTT TCTCGCCCAT
GAAAGCCAGC TCGCCAACGA AAGCGCCTTT CTGACCCTGA CAATCGGTCG TCAACCTGTG
CTTCTGACCC GGAACCGGTC GGGCGAATTG AAATGCTTTA TAAATGCATG CACGCATCGC
GGCGCGCGGC TGTGCCGGGA AAAACGGGGC AGGCGAGCGA CATTCACATG CCCGTTTCAC
GGCTGGACGT TCAGCAACGA TGGCGCGCTG CTGAATGTCA CAGACGAGGA AAATGGCGCA
TATCCGGAAC ATTTCGACCG GAGCGATCTG GGTCTCCGCG AAGTCGGACG CCTGGAATCC
TACAAGGGAT TCGTTTTCGC CAGCCTTTCA GAGGACGTGC CACCGCTGAG CGATTACCTT
GCGGGTACGA AGACCTTCAT CGATCTCATG GTGGATCAGT CGCCGGAAGG GAAGCTTGAA
ATCATCCGCG GGGTCGGGCG GTATACCTAT CGCGGCAACT GGAAGATGCA GACCGAGAAC
GGTCTCGACG GGTATCACGT GCCGACCGTG CATTCCAACT ACCTGTTGAC CGTCGCAAAC
CGAATGACGG GCGGTTCAAC GAACACCACC AAGAGCGCAA ACGTATCCGC GTGGATGAAG
ACGGATCAGG GCGGTTTTTT CTCATTCGAT CACGGACACG CTTTGATCTG GAACGCGTCG
GCCAGTTCTG CCTCCCGGCC CAATTTTGAG TTTGTCGACC AGTACAAGCG GAAATTCGGC
GAGGAGCGCT CCCGCTGGAT GACCGAAACC ACACGAAATC TTCTTTTGTT TCCGAATGTG
TTCCTGATGG ATCAGGTCAG CACACAAGTC CGTATCGTGC GTCCGATCTC GGTCGATGAA
ACGGAAATAA CGACATATTG CATCGCGCCG GTTGGAGAAA GTGCGCGGGC GCGGGCGATG
CGCATTCGAC AGTATGAGGA TTTCTTCAAT GCCAGCGGCA TGGCCACGCC CGACGATTTG
ACGGAGTTCA ACAATTGCCA GATCGCGTAT GGCCGCGATG GTGGTCGCTA TAACGATTTG
TCGCGCGGGG CAACGAGAAG CGTTCAAGGG TCGGGGAAGT TTGGCAAGGG GCTCAACATC
GACGCGACCA TGAGCAGCAT CAATGTCGCC GATGAAGGAC TTTTCGTCAC CATGCACAAG
GAGTGGATCG AGCGGATGAA ACACGCGATC GCGCAGGAGC GGGCGGAAGC GTCCCTCACT
CGCGAAAACG ATCGTTCGAG GGCCGCAGAA TGA
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| Protein sequence | MSTSGVSNPF DRIRHGLDSW LVEDTSSGRF MLDRAIFTDP ELFALEMKHI FERNWVFLAH
ESQLANESAF LTLTIGRQPV LLTRNRSGEL KCFINACTHR GARLCREKRG RRATFTCPFH
GWTFSNDGAL LNVTDEENGA YPEHFDRSDL GLREVGRLES YKGFVFASLS EDVPPLSDYL
AGTKTFIDLM VDQSPEGKLE IIRGVGRYTY RGNWKMQTEN GLDGYHVPTV HSNYLLTVAN
RMTGGSTNTT KSANVSAWMK TDQGGFFSFD HGHALIWNAS ASSASRPNFE FVDQYKRKFG
EERSRWMTET TRNLLLFPNV FLMDQVSTQV RIVRPISVDE TEITTYCIAP VGESARARAM
RIRQYEDFFN ASGMATPDDL TEFNNCQIAY GRDGGRYNDL SRGATRSVQG SGKFGKGLNI
DATMSSINVA DEGLFVTMHK EWIERMKHAI AQERAEASLT RENDRSRAAE
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