| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4897 |
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| Symbol | |
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| ID | 5195902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 11182 |
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| End bp | 12489 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640579338 |
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| Product | ring hydroxylating dioxygenase, alpha subunit |
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| Protein accession | YP_001260286 |
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| Protein GI | 148550856 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 0.227325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.4666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA GAAATGCAGT TGACGTTGCT GATCTATTTG ATCGCGACAC TGGTGTGCTG
AAGGCTAGTG CTTATTCGGA TCAGGCGGTT TACGATCTTG AGATGGAGCG GATCTTTGCG
CGATCCTGGC TGTTTCTCGG CCACGAGAGC CAAATTCCGA AGTTCGGTGA CTATATCACC
ACCACCATGG GTGAGGATTC GGTGATCCTC AGTCGTCAGG GGGATGGTTC GTTCGCTGCG
TTCCTCAATC AGTGCCGTCA CCGCGGCAAC CGCCTGTGCC TTGCGGACCG CGGCAACGCC
AAATCGTTCC GCTGCAGCTA TCATGGCTGG GTGTTCAATA ATGCCGGCGG ACTGGTGAGC
ATGCCGCACG AGGCGAACTA CACTATCGAC AAATCCAAAT GGGGGGCGCC GCGTGTCCCG
CGCGTCGAGA CCTACAAGGG GCTGATTTTC GGCAACTGGC GCGCCGATGC GCCCGACCTG
TTGAGTTCAC TGGGTGAGGC GACATGGTAC CTCGACGCCT TCCTCGACGC TAACGAAGGC
GGGGTCGAAC TCATTGGTCC TCAGCGGAAC ATCTCCTCCG CGAATTGGAA GTGGCAGGCC
GAACAGCACG CAACCGATCA TCTCCATGTG GCAGTTTCGC ATTTCTCTGG CTTTGCCGCA
CTCGCACCCG AAGGATCGCC TCCTCGCTCG TATGAACATA TCTTTCATCC AGGCGAGCAA
GGACATCAAT TTGCCCTTCC AAAACTCGGC CATGCATCGT CGGGTTTCTT CAAGAATATG
AACGACGGCG ACGCTGCGAT GTTGCAACAG TTTCCACCGC ACCCGGCCCC TGAATACTAT
TATGGACCCG GGCGAGACAT CATGCGGGAG CGATTGGGTG ACATCCGCAC CGATCATATG
GGAACGTTGG TGATGACGGT GTTCCCGAAT TTTTCGCTCA ATCGTGCCGC TCATTATCTG
CGCGTCTGGC AGCCGCGCGG TCCGCATAAG ACCGAGGTCT GGAACTATGT GATCGTCGAT
CGGAATATGC CGCAGGAAGT CAAGGACGCG GTCGTTCGCG GTTGTACGCT GGCCTTTAAC
GCGTCTGGCC TGCTCGAACA GGATGATGCG GAAAACGTGG CAATGTGCCA GCGCGGCGTG
AGCGAGGGGT ATATCGCCCG CCAAACACAT CTCAACATGG CGCTTGGGCT GGGCAAGGGT
GGGCCGAACC CGGACTATCC TGGGACGATC AATGATGTCT ATTCCGAAGA AGGCGGCCGA
GCCTTCTACT CACATTGGCA GGACATGCTG GCGGGAGATG AAGCATGA
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| Protein sequence | MAKRNAVDVA DLFDRDTGVL KASAYSDQAV YDLEMERIFA RSWLFLGHES QIPKFGDYIT
TTMGEDSVIL SRQGDGSFAA FLNQCRHRGN RLCLADRGNA KSFRCSYHGW VFNNAGGLVS
MPHEANYTID KSKWGAPRVP RVETYKGLIF GNWRADAPDL LSSLGEATWY LDAFLDANEG
GVELIGPQRN ISSANWKWQA EQHATDHLHV AVSHFSGFAA LAPEGSPPRS YEHIFHPGEQ
GHQFALPKLG HASSGFFKNM NDGDAAMLQQ FPPHPAPEYY YGPGRDIMRE RLGDIRTDHM
GTLVMTVFPN FSLNRAAHYL RVWQPRGPHK TEVWNYVIVD RNMPQEVKDA VVRGCTLAFN
ASGLLEQDDA ENVAMCQRGV SEGYIARQTH LNMALGLGKG GPNPDYPGTI NDVYSEEGGR
AFYSHWQDML AGDEA
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