More than 300 homologs were found in PanDaTox collection
for query gene Daro_3246 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  100 
 
 
456 aa  961    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  64.19 
 
 
448 aa  624  1e-177  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  61.93 
 
 
427 aa  561  1e-158  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  54.02 
 
 
455 aa  500  1e-140  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  42.82 
 
 
450 aa  350  4e-95  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  41.11 
 
 
459 aa  344  2e-93  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  39.57 
 
 
450 aa  321  9.999999999999999e-87  Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  38.84 
 
 
453 aa  321  1.9999999999999998e-86  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  38.84 
 
 
453 aa  321  1.9999999999999998e-86  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02394  hypothetical protein  38.84 
 
 
453 aa  321  1.9999999999999998e-86  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  38.84 
 
 
453 aa  321  1.9999999999999998e-86  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  38.84 
 
 
453 aa  319  5e-86  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  38.62 
 
 
453 aa  318  9e-86  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  40.48 
 
 
459 aa  315  9.999999999999999e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  41.71 
 
 
456 aa  313  3.9999999999999997e-84  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  38.41 
 
 
446 aa  306  5.0000000000000004e-82  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  38.1 
 
 
497 aa  300  4e-80  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  36.07 
 
 
471 aa  276  5e-73  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  36.07 
 
 
467 aa  276  5e-73  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  37.25 
 
 
447 aa  274  2.0000000000000002e-72  Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  37.67 
 
 
435 aa  271  1e-71  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  35.6 
 
 
471 aa  271  2e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  35.6 
 
 
471 aa  271  2e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  35.6 
 
 
471 aa  271  2e-71  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  35.6 
 
 
471 aa  271  2e-71  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  35.6 
 
 
471 aa  271  2e-71  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  35.6 
 
 
471 aa  271  2e-71  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  34.92 
 
 
471 aa  266  8e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  35.7 
 
 
447 aa  263  6e-69  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  33.62 
 
 
505 aa  251  2e-65  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  33.71 
 
 
444 aa  249  6e-65  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  35.27 
 
 
455 aa  249  8e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  35.03 
 
 
455 aa  248  1e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  35.27 
 
 
458 aa  249  1e-64  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  35.5 
 
 
458 aa  248  2e-64  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  35.03 
 
 
455 aa  248  2e-64  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  35.03 
 
 
455 aa  248  2e-64  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  35.5 
 
 
458 aa  248  2e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  35.08 
 
 
423 aa  248  2e-64  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  35.03 
 
 
455 aa  248  2e-64  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  34.51 
 
 
466 aa  241  2e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  34.51 
 
 
466 aa  240  2.9999999999999997e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  33.04 
 
 
468 aa  240  4e-62  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  34.04 
 
 
466 aa  238  2e-61  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  34.04 
 
 
466 aa  238  2e-61  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  34.04 
 
 
466 aa  238  2e-61  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  36.93 
 
 
438 aa  232  9e-60  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  36.93 
 
 
438 aa  232  9e-60  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  36.82 
 
 
438 aa  230  3e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  36.82 
 
 
438 aa  230  3e-59  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  36.82 
 
 
438 aa  230  3e-59  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  36.82 
 
 
438 aa  230  3e-59  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  36.82 
 
 
438 aa  230  3e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  36.82 
 
 
438 aa  230  3e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  36.82 
 
 
438 aa  230  3e-59  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  30.46 
 
 
463 aa  222  9.999999999999999e-57  Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  31.53 
 
 
447 aa  221  3e-56  Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  30.25 
 
 
463 aa  221  3e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  30.25 
 
 
463 aa  221  3e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  31.53 
 
 
447 aa  221  3e-56  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  30.25 
 
 
463 aa  220  5e-56  Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  30.25 
 
 
463 aa  220  5e-56  Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  30.25 
 
 
463 aa  220  5e-56  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  30.04 
 
 
463 aa  219  1e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  33.11 
 
 
487 aa  217  4e-55  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  32.59 
 
 
483 aa  216  5e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  32 
 
 
484 aa  216  5e-55  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  32 
 
 
484 aa  216  5e-55  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  32.44 
 
 
484 aa  216  8e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  32.17 
 
 
483 aa  216  9e-55  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  32.22 
 
 
484 aa  214  1.9999999999999998e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  33.19 
 
 
467 aa  214  2.9999999999999995e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  30.82 
 
 
468 aa  203  6e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  29.96 
 
 
458 aa  199  9e-50  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  31.38 
 
 
424 aa  192  7e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  28.48 
 
 
467 aa  192  8e-48  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4174  Rieske (2Fe-2S) domain-containing protein  30.18 
 
 
440 aa  174  2.9999999999999996e-42  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.000409814  normal  0.0305498 
 
 
-
 
NC_007951  Bxe_A3556  p-cumate dioxygenase large subunit (CmtAb)  29.02 
 
 
434 aa  170  4e-41  Burkholderia xenovorans LB400  Bacteria  normal  0.137255  normal 
 
 
-
 
NC_009511  Swit_1531  Rieske (2Fe-2S) domain-containing protein  30.32 
 
 
433 aa  169  6e-41  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0185016 
 
 
-
 
NC_012792  Vapar_5382  Rieske (2Fe-2S) domain protein  30.19 
 
 
438 aa  169  9e-41  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2898  ring hydroxylating dioxygenase, alpha subunit  30.43 
 
 
434 aa  165  1.0000000000000001e-39  Pseudomonas putida F1  Bacteria  normal  0.502891  normal  0.614972 
 
 
-
 
NC_007794  Saro_0538  Rieske (2Fe-2S) protein  30.39 
 
 
444 aa  163  5.0000000000000005e-39  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1874  Rieske (2Fe-2S) domain-containing protein  28.4 
 
 
436 aa  161  2e-38  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4071  Rieske (2Fe-2S) domain-containing protein  29.12 
 
 
429 aa  162  2e-38  Mycobacterium sp. JLS  Bacteria  normal  0.177236  normal 
 
 
-
 
NC_012791  Vapar_1502  Rieske (2Fe-2S) domain protein  29.18 
 
 
441 aa  161  2e-38  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_011894  Mnod_2368  benzoate 1,2-dioxygenase, large subunit  28.42 
 
 
449 aa  160  4e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1826  Rieske (2Fe-2S) domain-containing protein  28.5 
 
 
429 aa  160  4e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.942727 
 
 
-
 
NC_012791  Vapar_1493  Rieske (2Fe-2S) domain protein  26.64 
 
 
437 aa  160  7e-38  Variovorax paradoxus S110  Bacteria  normal  0.507919  n/a   
 
 
-
 
NC_009511  Swit_1758  ring hydroxylating dioxygenase, alpha subunit  27.55 
 
 
428 aa  159  1e-37  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1680  ring hydroxylating dioxygenase, alpha subunit  29.04 
 
 
447 aa  157  5.0000000000000005e-37  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.801472  n/a   
 
 
-
 
NC_007650  BTH_II0327  benzoate 1,2-dioxygenase, alpha subunit  28.47 
 
 
427 aa  156  7e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1343  Rieske (2Fe-2S) protein  26.7 
 
 
436 aa  156  9e-37  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2496  ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein  27.68 
 
 
427 aa  155  2e-36  Burkholderia sp. 383  Bacteria  normal  0.0124288  normal 
 
 
-
 
NC_010515  Bcenmc03_3901  Rieske (2Fe-2S) domain-containing protein  27.82 
 
 
427 aa  154  2e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.812744 
 
 
-
 
NC_010511  M446_1324  benzoate 1,2-dioxygenase, large subunit  29.13 
 
 
442 aa  155  2e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0648485 
 
 
-
 
NC_008543  Bcen2424_3619  Rieske (2Fe-2S) domain-containing protein  28.06 
 
 
427 aa  155  2e-36  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0164916  normal 
 
 
-
 
NC_010681  Bphyt_2156  Rieske (2Fe-2S) domain protein  27.82 
 
 
427 aa  154  2.9999999999999998e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2671  Rieske (2Fe-2S) domain-containing protein  28.76 
 
 
441 aa  154  4e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.549347  normal 
 
 
-
 
NC_007951  Bxe_A2105  putative (poly)aromatic ring hydroxylating dioxygenase, alpha subunit (Rieske (2Fe-2S) region)  27.58 
 
 
427 aa  154  5e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5079  Rieske (2Fe-2S) domain-containing protein  27.23 
 
 
448 aa  152  8.999999999999999e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.253861 
 
 
-
 
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