| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0890 |
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| Symbol | |
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| ID | 5199594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 980421 |
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| End bp | 981914 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640580436 |
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| Product | ring hydroxylating dioxygenase, alpha subunit |
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| Protein accession | YP_001261395 |
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| Protein GI | 148553813 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.145074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.391683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGG CAGGGGCGCC GCTACCCGAC ACCCGAGCAA TCCTGCCTCG GCCCGCCGCT
TCGGACGACC GGTCATGGCC CGCCCTCACA GGGCAGAAAG CGATTGACAG ATTCAAAATA
TATTGTTCAT ATATGACAAT TCAAGGAGAG GCCCCGGATC AGGGGCGACC AAATCACTCA
TGTAGTGGAG GACGCACGGT GGTGCCGAGC AGTGACTATC TGAAGTCTCT CGTGGATATC
GAGGCTGGCA GGATTAGCCC CGAAATCTTC ATCGATGAAG ATATTTATCG ACTGGAGCTG
GATCGGGTGT TCGGTCGGAA CTGGCTGTTC CTGGCGCACG ACAGCATGAT TCCGAAGCCG
GGCGATTTCT TCAGCACCTA TATGGGCGGC GATCCGGTCG TCGTCGCACG GCAGCCCGAT
GGTTCGGTGC GGGCGTTCCT CAACGCCTGT CGCCACCGGG GGATGCGGGT CTGTCGCGCC
GAGAGCGGCA ATACCAAGTC GTTCTTCTGC ACCTATCATG GCTGGGCCTA TGATACGGCG
GGCAACCTGA TCAACGTCCC GAACCTGTCG GATGCCTACA AGGACCGGCT GTCCCTCAAG
GACAACGGCC TCATCCCCGT CGCGCGGATC GAGAGCTACA AGGGGCTCAT CTTCGGCAAC
TTCGACGCCA CCGCTCCCTC GCTGGAAGAG CATCTGGGCG ATCTCAAATA TTATATCGAC
GGATGGGTCG ATCAGGTCGA CGGCGGCATC GAGGTCCTTC CCGGCGTCGT GCGGTGGACC
ATCAACGCCA ACTGGAAGCT CGCGGCCGAG CAGTTCGCGG GCGACACCTA TCATGCGCCG
ACCAGCCATG CGTCGTCGCT GCTGTCGTTC GGGCCGCCGT TCGAAGGCAA GGACGGCGCG
CATGTGGCCT TCCGCGAAGG GCATGGCGAA AGCTTCCTGT TCAAGCGCCA TACCCGCTTC
TCCGAGGATC CGCTCAGCCT CTACAACGAC GCCAAGCTCG AAGCCGCCAA GGCCAGGGTC
GGCGATCGCG CCGAGTTCGT CGCGAACTTC ACCGCTTTCC CCGCATTTTC GGGACTGCCC
GGTTCGTCGA ACATTCGCGT CTGGCATCCC AAGGGCCCCA ATAAATTCGA GATCTGGTCC
TTCACGGTGG TCGACAAGAA TGCACCGCCC GAGGCCAAGA AGGCGATGCA GGTCTCTGCC
TCCTTCACCG AGGGGCCGGC GGGCGTGGTC GAGACCGACG ACGGCGAGAA TTGGGGGCTG
ATCGGGGCGA TCCTTGAGCA GGGTCATCAG GCTCGCAAGA TGCGCTGGAA CTATCAGATG
GGCGACTACC CCGCCACCGG GCATGAGGAA TTCCCCGGCG CCTATCGCGA CAGCTTCTTC
GGCGAGGCCG GCCATCGGGC CTTCTATCGC CGGTGGCTCG AATTCATGAC CAGCGAGGAG
TGGCCCGTCC TCACCCAAGA AGAGCGCGAC GCGTTCAACA AGCCGGGAGC GTGA
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| Protein sequence | MLMAGAPLPD TRAILPRPAA SDDRSWPALT GQKAIDRFKI YCSYMTIQGE APDQGRPNHS
CSGGRTVVPS SDYLKSLVDI EAGRISPEIF IDEDIYRLEL DRVFGRNWLF LAHDSMIPKP
GDFFSTYMGG DPVVVARQPD GSVRAFLNAC RHRGMRVCRA ESGNTKSFFC TYHGWAYDTA
GNLINVPNLS DAYKDRLSLK DNGLIPVARI ESYKGLIFGN FDATAPSLEE HLGDLKYYID
GWVDQVDGGI EVLPGVVRWT INANWKLAAE QFAGDTYHAP TSHASSLLSF GPPFEGKDGA
HVAFREGHGE SFLFKRHTRF SEDPLSLYND AKLEAAKARV GDRAEFVANF TAFPAFSGLP
GSSNIRVWHP KGPNKFEIWS FTVVDKNAPP EAKKAMQVSA SFTEGPAGVV ETDDGENWGL
IGAILEQGHQ ARKMRWNYQM GDYPATGHEE FPGAYRDSFF GEAGHRAFYR RWLEFMTSEE
WPVLTQEERD AFNKPGA
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