| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3246 |
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| Symbol | |
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| ID | 3566384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3496532 |
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| End bp | 3497902 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681717 |
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| Product | ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region |
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| Protein accession | YP_286446 |
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| Protein GI | 71908859 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0000000178778 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTACTG CCAATGACGG AAGTCCGGTG CGCCTGAAAC GGCGGCCAAT TGCCGAATCG
GTCGCCAATC TCGACCGCTT GATGGATCTC GACAAGGGCC GCATGTCACG CGACCTGTTC
TGGGATCGCG ACATCTACGA ACAGGAACTG GAGCGGATCT TCGCCCGCTG CTGGCTGTTC
GTGGGGCACG AGTCGCAGAT TCCCAAGGCC GGTGACTACG TGTCGACCTA CATGGGTGAG
GACAACGTCC TGATCGTTCG CCAGAAGGAT GGCAGCATCA AGGGCTTCCT CAATACCTGC
CCGCACCGCG GCAACAAGGT CTGCTTCGCC GATCTCGGCA ACGCCCGCCA GTTCGTGTGC
AATTACCACG GCTGGGCCTT CGGTATCGAC GGCGGACTGA AGGGCATGCA TGCGTCCGAG
GCCTACGAGG AAACCGGGAT GGACAAGGCC GAGCATGGCC TGCACCCGGT GGCCCATATC
GACAGCTATC GCGGCCTAAT CTTCGCGACG CTCGACCCGC AGGCGCCAAC GCTGGCAGAG
TACCTCGGCG ACATGCGTCA TTACCTCGAC GCCATCTTCG ACATGGACGA GGGCGGTACC
GAGTTTGTGG GCGGCTGCGT CAAGTCGGTG ATCCAGTGCA ACTGGAAATA TGCCTCCGAG
AACTTCGTCG GCGACATCCT GCACGCCGGC TGGACCCACG ACTCGGGAGC CAAGGCGATG
GTCGGTGGTT CGGTGGCCGA AGTTCACAAA TTCCCGGATC AGTCCTACCA GGTCAATTTC
AACGGCCACG GCTGGGAGTT CAACCAGGAC ATCGTTGGCA ACTGCGCGAC GCTGGGCGAA
AAGGACCTGC TCAAGTACCT GTACGTGCTG CAGCCCAAGG TGGCCGAGCG CCACGATGAC
TTCCGCTCGC GGATGATCGG CGCCATTTCG TCCTGCACCT TGTTCCCGAA CACCTCCTTC
CTGCCCGGGC AGAACACCTT CCGTACCTGG CATCCGCGCG GCCCGGGCCA GATCGAGCTG
CACACCTGGA CCTTCGTCAA CAAGAACGCC CCGCAGGACA TCAAGGACAA GTGGCGCAAG
GGCACGATGA TGACCTTCAG CCCGTCCGGC GTGTTCGAAA TGGACGACGG CGAAAACTGG
GAATACTCAA CGCGTTCCAA TGCCGGCTAC GTGACCCGCC AGCAGGATCT TTACCTTGGT
CTGGGCCAGA ACAGCAAGCT CGACACCGAT CTGCCGGGCA ACGTCTATCG CGGCCAGATC
AATGAAGCCA ACCAGCGCGC CTTCTACCAG CGCTGGCTCG ACCTGATGAA GTCGGAAAGC
TGGAAGAGCG TCCCGCAACG CGACATCCCG AAAATGAAGG AGGCCGTATG A
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| Protein sequence | MCTANDGSPV RLKRRPIAES VANLDRLMDL DKGRMSRDLF WDRDIYEQEL ERIFARCWLF
VGHESQIPKA GDYVSTYMGE DNVLIVRQKD GSIKGFLNTC PHRGNKVCFA DLGNARQFVC
NYHGWAFGID GGLKGMHASE AYEETGMDKA EHGLHPVAHI DSYRGLIFAT LDPQAPTLAE
YLGDMRHYLD AIFDMDEGGT EFVGGCVKSV IQCNWKYASE NFVGDILHAG WTHDSGAKAM
VGGSVAEVHK FPDQSYQVNF NGHGWEFNQD IVGNCATLGE KDLLKYLYVL QPKVAERHDD
FRSRMIGAIS SCTLFPNTSF LPGQNTFRTW HPRGPGQIEL HTWTFVNKNA PQDIKDKWRK
GTMMTFSPSG VFEMDDGENW EYSTRSNAGY VTRQQDLYLG LGQNSKLDTD LPGNVYRGQI
NEANQRAFYQ RWLDLMKSES WKSVPQRDIP KMKEAV
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