| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3192 |
|---|
| Symbol | |
|---|
| ID | 5151454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3342300 |
|---|
| End bp | 3343598 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640558057 |
|---|
| Product | putative ring hydroxylating dioxygenase, alpha subunit |
|---|
| Protein accession | YP_001239210 |
|---|
| Protein GI | 148254625 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATC CACCTGAATT GCCGCTCGAC GCGCTGGTGC AGGAGCATCG CGTCCACCGC
TCGCTCTACA CCGACGAGGC GATCTTCGCC GACGAGATGA ACCGCGTGTT CGGCGGCACC
TGGACCTTTC TCGCCCATGA GAGCGAGCTG CCGGCGCCGC ACAGCTTCGT CCGTCGCAAG
CTCGGCCTGC GGCCGGTGAT CGTCAGCCGC GACCGCGACG GCGCGCTGCA CGTGCTGCTC
AACCGCTGCA CCCATCGTGG CGCCACCGTG TGCCGCCAGG ACGAGGGCAC GGCGCGGCGC
TTCACCTGTC CCTATCACAA CTGGTCGTTC GACAGCGCCG GCGCGCTGGT CGGCGTGCCG
ATCGAGGAAG GCTACGGCCC CGGCTTCGAC AAGGCGGCGC TCGGCCTCGG CAAGGCGCGG
GTCGCGAGCT ATCGCGGCTT CATCTTTGCG ACGTTGAACG CGGAGATGCC GGACCTCGTC
ACGCATCTCG GCCCGGCCGC GCAGCTGATC GACGAATGGC TCGACCGCTG GCCCGGCGCG
ACCTTGAAAT TGCAGCGTGG CACGCATCGC ATGATCTGCC TCGGCAATTG GAAGCTGGTC
TACGACAATT CCGCCGACGG CTATCATCCG GGCTTCTCAC ACATGTCGCT GCTGCGCATG
CGCAAGGACC GCTACGGCGC CGGCGTCGAC ATGCAGTGGA CGATCGGCAA TGTCGATCAC
GGCCTGCAGA CGGTGGCCGA TGTCGGCAAC GGCCACACCT TCATCGACCA GCGCGCCGAG
ATCAAACGCT ATTGGGAGCA GGCCGCGCCG ATGCCCGGCG AGACCCGTTA CGAGCAGGCG
ATCCGCGCCA AGCTCGGCGC CAAAGCGGAT ACCGCGCTCG ACGTCGTGAT GGGCTCGGGC
ATGAACCTCA ACATCTTCCC GAACCTTTTG ATCATCGGCA ACCAGATCCA GGTGATCGAG
CCGCAGAGGG TCGATCTGAC GCATCTGACC TGGTACGCGA CGGCGCTCGA GGCGCCGGAT
CTGCCCGACG AGGTCAATGC GCTGCGGATG CGGCTGCAGG AGGATTTTCC GAGCTTTGGC
GAGCCCGACG ATCTCGCCAA TTTCGAGGAG TGCCAGGCCG GCCTGTCGAT CCCCGAAATG
GAATGGGTGC TGACCAACCG CCATCTCGGC ACCGGCAAGG AATATATCGG CCCGAAGGGC
ATGCTGACGG GACCGGTGAC CGACGATCTG CCGCTGCGCG CATTCTGGCG CGAGTGGAAG
CGCCTGATGA CGTCAACGAC ACGATTGGCC GCCGCATGA
|
|---|
| Protein sequence | MSHPPELPLD ALVQEHRVHR SLYTDEAIFA DEMNRVFGGT WTFLAHESEL PAPHSFVRRK
LGLRPVIVSR DRDGALHVLL NRCTHRGATV CRQDEGTARR FTCPYHNWSF DSAGALVGVP
IEEGYGPGFD KAALGLGKAR VASYRGFIFA TLNAEMPDLV THLGPAAQLI DEWLDRWPGA
TLKLQRGTHR MICLGNWKLV YDNSADGYHP GFSHMSLLRM RKDRYGAGVD MQWTIGNVDH
GLQTVADVGN GHTFIDQRAE IKRYWEQAAP MPGETRYEQA IRAKLGAKAD TALDVVMGSG
MNLNIFPNLL IIGNQIQVIE PQRVDLTHLT WYATALEAPD LPDEVNALRM RLQEDFPSFG
EPDDLANFEE CQAGLSIPEM EWVLTNRHLG TGKEYIGPKG MLTGPVTDDL PLRAFWREWK
RLMTSTTRLA AA
|
|---|
| |