More than 300 homologs were found in PanDaTox collection
for query gene Pnap_2485 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  87.47 
 
 
447 aa  827    Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  100 
 
 
447 aa  934    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  44.02 
 
 
459 aa  370  1e-101  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  36.81 
 
 
450 aa  302  8.000000000000001e-81  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  36.04 
 
 
453 aa  283  4.0000000000000003e-75  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  36.04 
 
 
453 aa  283  6.000000000000001e-75  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  36.04 
 
 
453 aa  281  1e-74  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  36.04 
 
 
453 aa  281  1e-74  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  36.04 
 
 
453 aa  281  1e-74  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02394  hypothetical protein  36.04 
 
 
453 aa  281  1e-74  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  36.75 
 
 
446 aa  271  2e-71  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  35.63 
 
 
448 aa  270  4e-71  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  35.25 
 
 
455 aa  270  4e-71  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  35.7 
 
 
456 aa  263  6e-69  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  37.67 
 
 
497 aa  256  5e-67  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  34.91 
 
 
427 aa  253  4.0000000000000004e-66  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  36.45 
 
 
466 aa  251  1e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  36.45 
 
 
466 aa  251  2e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  36.45 
 
 
466 aa  251  2e-65  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  36.45 
 
 
466 aa  251  2e-65  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  36.45 
 
 
466 aa  251  2e-65  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  33.89 
 
 
450 aa  243  3.9999999999999997e-63  Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
456 aa  238  2e-61  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  36.63 
 
 
435 aa  233  4.0000000000000004e-60  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  33.41 
 
 
444 aa  231  1e-59  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
447 aa  230  4e-59  Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
447 aa  230  4e-59  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  230  5e-59  Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  229  6e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  229  6e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  229  9e-59  Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  229  9e-59  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  229  9e-59  Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  33.41 
 
 
463 aa  229  1e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  32.27 
 
 
459 aa  228  1e-58  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  34.47 
 
 
458 aa  224  2e-57  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  33.89 
 
 
455 aa  223  4e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
455 aa  223  4.9999999999999996e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
458 aa  222  8e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
458 aa  222  8e-57  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
455 aa  222  8e-57  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
455 aa  222  8e-57  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  33.65 
 
 
455 aa  222  8e-57  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  32.95 
 
 
438 aa  204  2e-51  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  2e-51  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  3e-51  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  3e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  3e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  3e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  32.95 
 
 
438 aa  204  3e-51  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  3e-51  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  32.95 
 
 
438 aa  204  3e-51  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  33.11 
 
 
487 aa  199  9e-50  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  33.75 
 
 
483 aa  196  1e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  33.5 
 
 
483 aa  195  1e-48  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  33.5 
 
 
484 aa  195  1e-48  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  33.5 
 
 
484 aa  195  1e-48  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  33.42 
 
 
484 aa  192  7e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  33.5 
 
 
484 aa  192  8e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  32.35 
 
 
467 aa  190  4e-47  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  29.84 
 
 
505 aa  186  5e-46  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  30.53 
 
 
458 aa  182  7e-45  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  29.74 
 
 
424 aa  182  7e-45  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  30.89 
 
 
467 aa  182  1e-44  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  31.38 
 
 
468 aa  182  1e-44  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  29.98 
 
 
468 aa  178  1e-43  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  29.39 
 
 
471 aa  177  2e-43  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  29.39 
 
 
467 aa  177  3e-43  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  29.35 
 
 
471 aa  175  1.9999999999999998e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  30.7 
 
 
423 aa  175  1.9999999999999998e-42  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  28.88 
 
 
471 aa  170  5e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  28.88 
 
 
471 aa  170  5e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  28.88 
 
 
471 aa  170  5e-41  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  28.88 
 
 
471 aa  170  5e-41  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  28.88 
 
 
471 aa  170  5e-41  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  28.88 
 
 
471 aa  170  5e-41  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0327  benzoate 1,2-dioxygenase, alpha subunit  29.02 
 
 
427 aa  166  1.0000000000000001e-39  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3192  putative ring hydroxylating dioxygenase, alpha subunit  31.26 
 
 
432 aa  165  1.0000000000000001e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5079  Rieske (2Fe-2S) domain-containing protein  29.25 
 
 
448 aa  164  4.0000000000000004e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.253861 
 
 
-
 
NC_009077  Mjls_4071  Rieske (2Fe-2S) domain-containing protein  30 
 
 
429 aa  164  4.0000000000000004e-39  Mycobacterium sp. JLS  Bacteria  normal  0.177236  normal 
 
 
-
 
NC_008543  Bcen2424_3619  Rieske (2Fe-2S) domain-containing protein  29.75 
 
 
427 aa  163  5.0000000000000005e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0164916  normal 
 
 
-
 
NC_010515  Bcenmc03_3901  Rieske (2Fe-2S) domain-containing protein  29.52 
 
 
427 aa  163  7e-39  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.812744 
 
 
-
 
NC_008391  Bamb_5355  Rieske (2Fe-2S) domain-containing protein  29.71 
 
 
427 aa  162  8.000000000000001e-39  Burkholderia ambifaria AMMD  Bacteria  normal  0.569805  normal  0.872686 
 
 
-
 
NC_009719  Plav_1761  Rieske (2Fe-2S) domain-containing protein  29.78 
 
 
470 aa  161  2e-38  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.104126 
 
 
-
 
NC_010501  PputW619_2710  benzoate 1,2-dioxygenase, large subunit  30.94 
 
 
452 aa  161  3e-38  Pseudomonas putida W619  Bacteria  normal  normal  0.109533 
 
 
-
 
NC_011662  Tmz1t_3096  benzoate 1,2-dioxygenase, large subunit  30.25 
 
 
444 aa  160  4e-38  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1531  Rieske (2Fe-2S) domain-containing protein  31.65 
 
 
433 aa  160  4e-38  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0185016 
 
 
-
 
NC_010552  BamMC406_3525  Rieske (2Fe-2S) domain-containing protein  29.98 
 
 
427 aa  160  5e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0996141 
 
 
-
 
NC_010322  PputGB1_2688  benzoate 1,2-dioxygenase, large subunit  30.11 
 
 
457 aa  157  3e-37  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1826  Rieske (2Fe-2S) domain-containing protein  29.6 
 
 
429 aa  157  3e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.942727 
 
 
-
 
NC_008699  Noca_0826  Rieske (2Fe-2S) domain-containing protein  31.33 
 
 
443 aa  157  4e-37  Nocardioides sp. JS614  Bacteria  normal  0.212221  n/a   
 
 
-
 
NC_002947  PP_3161  benzoate dioxygenase, alpha subunit  30.39 
 
 
452 aa  157  5.0000000000000005e-37  Pseudomonas putida KT2440  Bacteria  normal  0.123489  normal  0.472768 
 
 
-
 
NC_009512  Pput_2554  Rieske (2Fe-2S) domain-containing protein  30.39 
 
 
452 aa  157  5.0000000000000005e-37  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_08590  Benzoate-1,2-dioxygenase oxygenase component, alpha subunit  30.48 
 
 
453 aa  156  8e-37  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1758  ring hydroxylating dioxygenase, alpha subunit  30.36 
 
 
428 aa  156  8e-37  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2496  ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein  28.74 
 
 
427 aa  155  1e-36  Burkholderia sp. 383  Bacteria  normal  0.0124288  normal 
 
 
-
 
NC_011894  Mnod_2368  benzoate 1,2-dioxygenase, large subunit  30.34 
 
 
449 aa  155  2e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3556  p-cumate dioxygenase large subunit (CmtAb)  29.33 
 
 
434 aa  154  2e-36  Burkholderia xenovorans LB400  Bacteria  normal  0.137255  normal 
 
 
-
 
NC_009426  Saro_3864  Rieske (2Fe-2S) domain-containing protein  30.14 
 
 
492 aa  154  2e-36  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2105  putative (poly)aromatic ring hydroxylating dioxygenase, alpha subunit (Rieske (2Fe-2S) region)  29.13 
 
 
427 aa  154  2.9999999999999998e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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