| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1647 |
|---|
| Symbol | |
|---|
| ID | 4613935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1763095 |
|---|
| End bp | 1764549 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639791318 |
|---|
| Product | ring hydroxylating dioxygenase, alpha subunit |
|---|
| Protein accession | YP_937644 |
|---|
| Protein GI | 119867692 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGATC ACGGTGAGGT GTTAGCGGCT GTACGCACTG GCATGATCCC GGCGCACGTG
TATAACGACA AGCAAATTTT CTCGCTCGAG AAGGAGCGCC TGTTCAGTCG GGCGTGGTTG
TTCGTGGCGC ACGAGTCGGA GATTCCGCAG CCGGGGGACT ACGTGGTCAG ACAAGTGTTG
CAGGATTCGT TCATCGTCGC TCGTGATTCT GCCGGCGAGA TCCGGGTGAT GTTCAATATG
TGCCTCCATC GCGGTATGCA GGTTTGCCGG GCGGAAATGG GGAACGCGTC GAACTTCAGA
TGCCCGTACC ACGGGTGGTC TTACCGCAAT GACGGTCGCA TTATTGGCCT GCCGTTTCAC
CAAGAGGCTT ACGGAGGAGA CGCCGGGTTT AACAAGACGG GGCAGACCTT GTTGCCCGCG
CCGAGTGTGG CCAGCTACAA CGGGTTGATC TTTCTGTCGA TGGATCCTGA CGCAGAATCG
CTTGAAGACT ATCTGGGTGA TTTCAGGTTC TATCTCGATT TCTACACCAA GCAAGGCCCC
AACGGTCTTG AGGTGCGAGG TCCGCAGCGT TGGCGGGTAA AAGCGAACTG GAAGATCGCA
GCTGAAAATT TCGCCGGGGA CATGTACCAC ACACCTCAGA CGCACACGTC GGTGGTCGAG
ATCGGCCTGT TCCGAGAGCC GAAGGCTAAC AAGCGCAAAG ACGGCGCCAC GTATTGGGCG
GGTAGAGGTG GGGGCACCAC ATACAAGCTG CCCGAGGGGA GTTTCGAGGA CCGGATGAGC
TACGTGGGCT ACCCGGCGGA CATGATTAGT CGAGCCAAGG CCACCTGGAC CGAGCAGCAG
CAACAAGTCG TCGGCACCGA CGGGTTCATG ATCTCGGCCG CGACGTGTTT TCCCAACATC
AGTTTCGTGC ACAACTGGCC GAAAGTGGAG GACGGGGAGC ACGTCTTGCC GTTCATTTCA
ATCCGGGTGT GGCAGCCAAT CAGCGAGAAC GAAACCGAGG TGCTGTCGTG GTTTGCGGTG
GATTCTGATG CCCCGGCAGA CTTTAAGGCG GACTCGTATA AGGCTTATTT GATGTGCTTC
GGCTCGACGG GAATGTTCGA GCAAGACGAT GTCGAGAACT GGGTGTCGCT GACCAACACC
GCGGGGGGTT CCATGGCCCG CCGACTGCGG CTGAACAGCC GGATGGGGCT GCTCGCAGAC
GATGCCCGGG TGGTCGACAC CCTAAGCAGC GCTCAATTCC ACGGGCCTGG ATACGCTCAG
CTCGGCTACA ACGAGAACAA TCAACGGGAA TTGTTGAGGC TCTGGGCCGA CTACCTCGAC
ATGCCGCCGC TGCGAGTCGA CCCGGCTACT GTGCTCACGG ACAACCCGCA AGGTATTGAG
CCGATGGTGC AGACCAACGG CGGGGCCGTC GCCGGTATCG ACTCGGAGTC GGCTACGACG
TCGGTGACGC TGTGA
|
|---|
| Protein sequence | MQDHGEVLAA VRTGMIPAHV YNDKQIFSLE KERLFSRAWL FVAHESEIPQ PGDYVVRQVL
QDSFIVARDS AGEIRVMFNM CLHRGMQVCR AEMGNASNFR CPYHGWSYRN DGRIIGLPFH
QEAYGGDAGF NKTGQTLLPA PSVASYNGLI FLSMDPDAES LEDYLGDFRF YLDFYTKQGP
NGLEVRGPQR WRVKANWKIA AENFAGDMYH TPQTHTSVVE IGLFREPKAN KRKDGATYWA
GRGGGTTYKL PEGSFEDRMS YVGYPADMIS RAKATWTEQQ QQVVGTDGFM ISAATCFPNI
SFVHNWPKVE DGEHVLPFIS IRVWQPISEN ETEVLSWFAV DSDAPADFKA DSYKAYLMCF
GSTGMFEQDD VENWVSLTNT AGGSMARRLR LNSRMGLLAD DARVVDTLSS AQFHGPGYAQ
LGYNENNQRE LLRLWADYLD MPPLRVDPAT VLTDNPQGIE PMVQTNGGAV AGIDSESATT
SVTL
|
|---|
| |