| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1758 |
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| Symbol | |
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| ID | 5200192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1966330 |
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| End bp | 1967616 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581305 |
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| Product | ring hydroxylating dioxygenase, alpha subunit |
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| Protein accession | YP_001262258 |
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| Protein GI | 148554676 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CATTTGAGAA GCATCCGACC GGGACCGCCT GGGTCGTCGA GGATCGCGAC
AGTTTCCGGG TCGCGCGCAC GACCTTCACC GACCAGGACG TGCTGGAGCG GGAGCGGGCG
GCCATCTTCG ACCGTTGCTG GCTCTATATC GGCCACGAGT CCGAGCTGCC CAATCCCAAT
GATTTCGTGC GCCGCGCGGT CGGGGGCCGC GACCTGGTCT TCAACCGCGA CCGCAAGGGC
GACTATCACG CCTTCTTCAA CAGCTGCCCG CATCGCGGCG CGGCGGTGGT GCGGGAGGAC
AAGGGATCGG CGATCTCGTT CAAATGCTTC TACCACGGCT GGTCGTTCAA CAATAACGGG
GCCTTCGCCA CCCGCTTCGC GGCGGGCACC TATCCCGAGG ATTTCAACAA GGACGGCTGC
GCCAATCTGG TGGCGGTGCC CAGGCTGGCC GGTTATGCCG GCTTCTGGTT CGTCAATTTC
GACGCGAACG CCGAGAGCCT CGAAGACTAT CTGGCCGGGG CGAAGGACTT CCTCCAGGTC
GTCGCCGACC ATGGCGCCGA CGGCATGGAG ATCGTCGGCG GCATCCAGGA ATATAGCGTG
CGCGCCAACT GGAAGCTGCT CGTCGAGAAC AGTTTCGACG GCTATCACGC GCACGAGACC
CATTCGACCT ATCTCGAGTA TCTGGTCGAC GCGATCGGCG GGCCGGCCGA GCTGTTCCCG
TCGCGCGGCA ATATCTCGCG CGCCTATGAT CTGGGCAACG GTCATGCCGT GATCGAGGGC
CCCGCCCCCT GGGGCCGCCC GGTCGCGCAA TGGATTCCCG CCTGGGGCGA GGATGGCCGC
GAGGAGATCG CGGCGATCTA CGCGGAGTTG GAGAAGCGGC TCGGCAAGGA GCGGGCCGAG
CAGGTCGCCT ATGGCAACCG CAACCTGCTG ATCTTCCCCA ACCTCGTGAT CAACGACATC
ATGGCGATCA CCGTCCGGAC CTTCTACCCG GAGCAGCCCG ACTATATGAA CGTCAACAGC
TGGGCGCTCG CGCCCAAGGG CGAGGCGCGC CATTTCCGCA AGCGCCGGCT CGACAATTTC
CTCGAATTCC TGGGGCCGGG CGGCTTCGCG ACGCCCGACG ACGTCGAGGC GCTCGAATCC
TGCCAGCGTT CCTACCGCAA CCGCGCGGCG GCGGGCTGGA ACGACATCTC GCGCGGGATG
CTGCGGGACG AGCCGCTGGC GGACGACGAG GCGCAGATGC GCGCCTTCTG GCGCGAATGG
GATCGCCGGG TGGCGAAGGC GGGGTGA
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| Protein sequence | MATAFEKHPT GTAWVVEDRD SFRVARTTFT DQDVLERERA AIFDRCWLYI GHESELPNPN
DFVRRAVGGR DLVFNRDRKG DYHAFFNSCP HRGAAVVRED KGSAISFKCF YHGWSFNNNG
AFATRFAAGT YPEDFNKDGC ANLVAVPRLA GYAGFWFVNF DANAESLEDY LAGAKDFLQV
VADHGADGME IVGGIQEYSV RANWKLLVEN SFDGYHAHET HSTYLEYLVD AIGGPAELFP
SRGNISRAYD LGNGHAVIEG PAPWGRPVAQ WIPAWGEDGR EEIAAIYAEL EKRLGKERAE
QVAYGNRNLL IFPNLVINDI MAITVRTFYP EQPDYMNVNS WALAPKGEAR HFRKRRLDNF
LEFLGPGGFA TPDDVEALES CQRSYRNRAA AGWNDISRGM LRDEPLADDE AQMRAFWREW
DRRVAKAG
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