| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3556 |
|---|
| Symbol | |
|---|
| ID | 4004901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1006454 |
|---|
| End bp | 1007758 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637946085 |
|---|
| Product | p-cumate dioxygenase large subunit (CmtAb) |
|---|
| Protein accession | YP_557484 |
|---|
| Protein GI | 91782278 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.137255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATG AGTCGAAGTT GGTGGAGGTA GACGAAAAGC ACCTCCAGTT CCGGGTGGCC
CGGGAAGCAT TCGTCAGTGA GCAGATCCTG TCCGGTGAGT ACGAAAAGAT CTTCGACCGG
TGCTGGCTGT ACGTCGGGCA CGTGTCCGAG TTCAGCAAGC CCGGTGATTT CGTCACACGT
ACCATTGCGC GACGCAACCT GCTCGTAACG ATGGGAACGG ACAACAGGAT CAATGCGTTC
TTTAACACCT GCCCCCACCG CGGGGCGACG GTTTGTCGGG ATCGGGCCGG CAATTCGAAG
AACTTCCAGT GCTTCTATCA CGGCTGGGTA TTCGGCTGCG ACGGCAACCT CAAGAGCCAG
CCGGGCAAGG ACCGGTATTG CGCCGACTTC ATCGCGAGCG GAGCGGGCAA TCTCGTATCC
GTACCGCGAT TCGACATCTA TGCGGGTTTC TGCTTCGTCA GCTTCAACGC AGAGGTCGAG
CCGTTACCCG ACTATCTGGC GGGCGCGAAG GAATACCTCG ACCTGGTGTC GAGGTATTCC
GAGAGTGGCA TGGCGATTTC CAGTGGCACG CAGGAGTACG CGATCCGTGC GAACTGGAAA
CTGCTGGTGG AAAACAGCGT CGATGGCTAC CACGCGGTGA GCACGCATGC TACCTACCTC
GATTATCTGA AGAACACCAA TGGCAGCCTG TCCAGTACGA AACTCGAGGG GACGAGCTAC
GATCTGGGCA ATGGTCACGC GGTGCTCGAA TACACAGCCC CCTGGGGGCG CCCGATTGCT
TCGTGGGTAC CGCTCTGGGG TGAGCAGGGG AAGAAGGAAA TCGACCAGAT ATATGCCCGC
CTTGTCGAGC TTCATGGCGA GGACATGGCT GATCGTATGG CGCACAAGAA CCGGAACCTG
CTGATTTTTC CGAACCTTGT CGTCAACGAC ATCATGGCCA TCACGGTCCG GACGTTCTAC
CCACAGGCAC CGAACTACAT GCTGGTCAAT GGCTGGTCGC TCGCACCCAG AGAGGAGTCT
GAGTGGGCGA AGAAGTTCCG GCTCAGCAAC TTTCTCGAGT TCCTCGGGCC GGGCGGATTC
GCCACGCCCG ATGACGTCGA GGCGCTGGAG TCCTGCCAGA ACGGTTTCAG CAACTATCGG
CTGGTGCCGT GGAGCGACAT CTCCAAGGGC ATGGGCAAGG CGTCGCCCAA CTACGACGAC
GAACTACAGA TGCGCGCGTT CTGGACACGC TGGAATCAGT ACATCAGCGG CTCGCCGTCT
CCGCAGGCGA CCATCCGCCG GCTCCCGTCA GCAACCGCAG CCTGA
|
|---|
| Protein sequence | MENESKLVEV DEKHLQFRVA REAFVSEQIL SGEYEKIFDR CWLYVGHVSE FSKPGDFVTR
TIARRNLLVT MGTDNRINAF FNTCPHRGAT VCRDRAGNSK NFQCFYHGWV FGCDGNLKSQ
PGKDRYCADF IASGAGNLVS VPRFDIYAGF CFVSFNAEVE PLPDYLAGAK EYLDLVSRYS
ESGMAISSGT QEYAIRANWK LLVENSVDGY HAVSTHATYL DYLKNTNGSL SSTKLEGTSY
DLGNGHAVLE YTAPWGRPIA SWVPLWGEQG KKEIDQIYAR LVELHGEDMA DRMAHKNRNL
LIFPNLVVND IMAITVRTFY PQAPNYMLVN GWSLAPREES EWAKKFRLSN FLEFLGPGGF
ATPDDVEALE SCQNGFSNYR LVPWSDISKG MGKASPNYDD ELQMRAFWTR WNQYISGSPS
PQATIRRLPS ATAA
|
|---|
| |