| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4280 |
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| Symbol | |
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| ID | 5197550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4721208 |
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| End bp | 4722479 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640583834 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001264758 |
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| Protein GI | 148557176 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.369719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.899409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGCA TGACGGATTT CGTGGATGCC ACCAACAACA GGGTGAGCCG CTCCATCTTC
CACGACGAGG AGATTTACCG CCAGGAACTG GAAAGACTGT TCCGCAAATG CTGGCTGCTG
ATCGGACATG AGAGCCAGAT TCCAGAGATC GGCGACTTCT TCCTGACGCG GATGGGGGAG
GATCAGGTGA TCCTGTCCCG GGGCCGTGAC GGGAAGCCGC ATGCCTTCCT CAACACCTGC
CGGCACAAGG GCATGCGCGT CTGCCGCTAT GACGAGGGCA ACACCAAGCG CTTCTATTGC
CCCTATCATG GCTGGTCCTA CGACCTGAAC GGCGACCTCC AGGGCGTTCC CGAGCGCCAG
GGCAGCTATC CCGCCAGCTT CGATCGCAAG GAGTGGGGGC TGATCCAGGT GGCGAGGATC
GCCAGCTTCC GGGGGACGAT CTGGGCGACC TGGAATCCGG AGGCCCCCGA TTTCGAGGAC
TATCTGGGCG ATATCAAGGA ATCGCTCTGG TACGGCCTCG GCGCCTGGGA CGGCGGCGAC
GGCGAGATCG AGGTGCTGGG CGGCGTCCAG AAATGGAACG TGCCGTGCAA CTGGAAATTC
GTCTCGGAGA ATTCCGGCGG CGATCCGCTG CACAACATCA GCCACCAGTC GACCGACCTC
GCCCGCATCG GTCCGCGCAG CGGCGTCGGC CGGCGCGACC CGCTCGGCGA GCTGTTCCTG
ACCTATACGC CGAACGGCCA TGGCCTGATC TACGAGAGGA TCGACGTCAC CCAGCCGCGC
GGCCATTATT CGATGTCGAA GATCACCTCC GAATATTTCG AGGATTGCTG GCGCCGGCGG
CTCGACCGGC TGGGCGAGAA GGCGGGATCG CCGCTGGTGC TCGGCAACAT CTTCCCGAAC
GCCGGCTTCC ACGTCCAGCA GCCGCGGGTG CTGCTGATGG CCCATCCCAA CGGTCCGCGC
ACGTCGCAGG CCTGGCGGAT GTACTTCGTC GACAAGGACG CGCCCGAGGA GGCCAAGGAT
TTCCTGCGCC GCTACTATGT TTCCTACAGC GGCCCCGGCG GCATGACCGA GCAGGACGAC
ATGGAGAATT GGGGCTACGC CTCCGAAGGC GCGGCGGTCC ACGCCGCCCA GGATGCGCCG
TTCAGCTATG TCGCCGACAC CGGCAATTTC GCGGACCCCT ACATCCCGGG ACCGGTCAGC
AAGTATTGGC TGACCGAGCA CAACAATATG GGCTTCTACC GGCGCTGGGC CGAACTGATG
GCGGCGGAAT GA
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| Protein sequence | MRSMTDFVDA TNNRVSRSIF HDEEIYRQEL ERLFRKCWLL IGHESQIPEI GDFFLTRMGE
DQVILSRGRD GKPHAFLNTC RHKGMRVCRY DEGNTKRFYC PYHGWSYDLN GDLQGVPERQ
GSYPASFDRK EWGLIQVARI ASFRGTIWAT WNPEAPDFED YLGDIKESLW YGLGAWDGGD
GEIEVLGGVQ KWNVPCNWKF VSENSGGDPL HNISHQSTDL ARIGPRSGVG RRDPLGELFL
TYTPNGHGLI YERIDVTQPR GHYSMSKITS EYFEDCWRRR LDRLGEKAGS PLVLGNIFPN
AGFHVQQPRV LLMAHPNGPR TSQAWRMYFV DKDAPEEAKD FLRRYYVSYS GPGGMTEQDD
MENWGYASEG AAVHAAQDAP FSYVADTGNF ADPYIPGPVS KYWLTEHNNM GFYRRWAELM
AAE
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